| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1675 |
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| Symbol | |
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| ID | 4172266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2001601 |
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| End bp | 2002503 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054685 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661251 |
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| Protein GI | 109897996 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.297229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCACG CCGTTACCCT TGAAGCCCTT AGAGTGCTAA ACGCCATTCA TAGCAAGGGC
AGCTTTGCTG CCGCTGCAGA CGCGTTATTC AAAGTGCCTT CAGCTTTAAC TTATACCATC
AGTAAACTTG AAGCGGATTT GGGAGTTGCT CTTTTCGATC GCAAAGGGCA ACGGGCTATA
CTAACTCCGG CTGGCAAATT GGTGCTTAGC GAGGGGAGTG AAATATTAAG AGCCGCCGAC
GATTTAGAAG AGCGGGTTCA ACAATTAGAA TCTGGCTGGG AATCAAAATT GGTGATCTCA
AAAGATACAA TCATCTCTGA AGCGCCATTA CTCAAGCTTA TCGCGGAATT TTGCACCCTG
GATAAACATG TAGACATCAC CTTGATTGAG GAAGCACTTG GTGGCGGTTG GGATGCACTT
CAAACAAATC GTGCCGATAT TGCTTTAGGC GTTACGGGCG AACTACCCAA GGGACAATAT
GATGTCGCGC TTCTTGGGGA GTTAGAATTT GTATTTGCTG TGAGCGCTAA GCATCCGTTG
GCAGATTTTG TTGGTTTAAT AGAAGGGCAT CATATACGCC AATACCCTTA CATAGTCGTG
GCCGATAGTT CCCGCACCTT GCCGGGACGT ACCAGTGGGT TGTTCGATAA TAAACAGTTG
ATTCGAGTAA GTAGCATGAA AAGTAAAGCC CAAGCCCAGG CCGCCGGGAT TGGCGTGGGT
TTTCTACCTA TTCATATTGC AAAGCCATTT TTAGACAATG GCAGCTTAGT GGCAAAAGGT
ACATCACTAC CTCGCCCGCC TATTCCTATT TATTTTGCCA GAGAAAAATC AACCTCAGGC
AAGGCCGCGC AATGGTTCTG GGAGCGATTG AGTCAGTATA ACTGGCTGGC CACTCAATCG
TGA
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| Protein sequence | MRHAVTLEAL RVLNAIHSKG SFAAAADALF KVPSALTYTI SKLEADLGVA LFDRKGQRAI
LTPAGKLVLS EGSEILRAAD DLEERVQQLE SGWESKLVIS KDTIISEAPL LKLIAEFCTL
DKHVDITLIE EALGGGWDAL QTNRADIALG VTGELPKGQY DVALLGELEF VFAVSAKHPL
ADFVGLIEGH HIRQYPYIVV ADSSRTLPGR TSGLFDNKQL IRVSSMKSKA QAQAAGIGVG
FLPIHIAKPF LDNGSLVAKG TSLPRPPIPI YFAREKSTSG KAAQWFWERL SQYNWLATQS
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