| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1629 |
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| Symbol | |
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| ID | 4174058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1937064 |
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| End bp | 1938620 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054639 |
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| Product | hypothetical protein |
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| Protein accession | YP_661205 |
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| Protein GI | 109897950 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1322] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.158753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTT TCCAGCACTT TTCCTTCGAT GATCCCAATC TATTAATCTT ACTTGGCTTA
GTAGCCGTTT TGGGGATCCT TATCGGCTGG TTGTTAAACG CGGTATTCTC TGGTCGCCAG
CAAGCTGAGC TAACATCCCA GCTAGAGCAT CGTTATCAAC AGTCGCAAAC CTATGTTCAG
CAACAAGTCC TGGACTTAAA AGAAGCGCTG CAAGAATCAA ACAGCGAGAA TAAAAATTTG
CGTCAGTTGC AGTTAAATCA ACAAAATGCG TTAGGGCAAC TGAGCCAGCA AGTAGAGCGT
ATCCCCGTGC TTGAACAAGA CAGCAAACGT TGGCAAGGGC ATTATCAGCA AATTCAGCAA
CACGCGGCAG ATTTACGTGA AGAACTGGCC GAAAAAACAG CGCGTTTTGA ACAAGAGAAG
CTTGCCAGCG ATGAGAAGCT TGCTTTGCTT GAGTCATCAG AACAACGTTT GCAACAGCAG
TTTGAGAACT TAGCGAATAA AATTTTCGAG CAGAAAAATA ACGCATTCCA GCAGTCAAGC
AAAGCCGGTC TCGATGCCTT GCTGGGTCCG CTGAAAGACC AAATTGAAGG GTTTAAAAAG
CAAGTCAGTG ACCAGTACGT GAAAGAGGGC CAAGAAAGAG CCTCACTTAA AACGGAAATC
ATGGGCTTAA AAGAGCTGAA TCAGCAAATT ACCCAAGATG CCGCTGCGCT CACAAAAGCC
CTTAAGGGTG ATAATAAGCA GCAAGGCAAT TGGGGGGAAG TCGTATTAGA GCGGGTATTA
AAAGAATCCG GTTTGCGAGA GGGGCACGAA TTTGATACCC AAGTTGCCCT TAAAAATGAC
AGTGGTAAAA GTTATCAGCC TGATGTCGTG GTGCACTTGC CCAACGACAA AGACGTAGTG
ATTGATTCAA AAGTGTCTCT TGCCGCCTAT GAGCGCTATT TTAACGAAGA ACATGAAGAA
TCACGGCAGG TGTATTTAAA TCAACATGTC GCATCTTTGC GTAATCATAT CAAAGAGTTA
GGTAATAAGG ATTATCAAGA CTTAAAAGGC TTAAGAACAC TGGATTATGT GTTGATGTTT
ATTCCTGTCG AGCCCGCATT TTTACTCGCT GCTGAACATG CTCCTGAGCT GGTCAAACTT
GCCTTTGATA ATAATATTAT GTTGGTCAGT CCAACGAATT TGCTGGTGGC GCTGCGCACT
ATCAACAACA TTTGGCAGTA CGAATATCAA AATCAAAACG CCCAGAAAAT TGCGGCTAAC
GCAGGCAAAT TGTATGACAA GTTTCATGGG TTCGTCAGTG ACATGGAAAA AGTCGGCAAA
TCGATGGAAT CTACACAGCG TAACTATGAC GCCGCAATGA ATAAGCTAAC TACGGGTAAA
GGCAACTTGA TCCGCCAAGC AGAGCAATTT AAAGCCTTAG GAGTGCAATC GAACAAGAAA
CTTGATGCGC GTTTATTGCA GGAGGATGAC ATTGAACTGC CTGATAACAA TCCTGCTGAA
GACTCAGACA ACTTGCTGAG TAAGGCGCCG CGGCAAAATG ATGAAAAATT ATCATGA
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| Protein sequence | MNFFQHFSFD DPNLLILLGL VAVLGILIGW LLNAVFSGRQ QAELTSQLEH RYQQSQTYVQ
QQVLDLKEAL QESNSENKNL RQLQLNQQNA LGQLSQQVER IPVLEQDSKR WQGHYQQIQQ
HAADLREELA EKTARFEQEK LASDEKLALL ESSEQRLQQQ FENLANKIFE QKNNAFQQSS
KAGLDALLGP LKDQIEGFKK QVSDQYVKEG QERASLKTEI MGLKELNQQI TQDAAALTKA
LKGDNKQQGN WGEVVLERVL KESGLREGHE FDTQVALKND SGKSYQPDVV VHLPNDKDVV
IDSKVSLAAY ERYFNEEHEE SRQVYLNQHV ASLRNHIKEL GNKDYQDLKG LRTLDYVLMF
IPVEPAFLLA AEHAPELVKL AFDNNIMLVS PTNLLVALRT INNIWQYEYQ NQNAQKIAAN
AGKLYDKFHG FVSDMEKVGK SMESTQRNYD AAMNKLTTGK GNLIRQAEQF KALGVQSNKK
LDARLLQEDD IELPDNNPAE DSDNLLSKAP RQNDEKLS
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