| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1627 |
|---|
| Symbol | |
|---|
| ID | 4174056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 1933698 |
|---|
| End bp | 1935074 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638054637 |
|---|
| Product | para-aminobenzoate synthase, subunit I |
|---|
| Protein accession | YP_661203 |
|---|
| Protein GI | 109897948 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.18817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTT TATTCCAGCA CTTCGCCGAC CAAGAATGGG CCATATTGTT AGACTCTGCC
GACAGTGTCC ACGTTGATGG TCGGTATGAT GTTATAGTTG CAAACCCACT CGCCACGCTC
GTCACCAACG GTGAAAGCAC ACACATTTGC TTCACGGGCG CGCCCCAGAA CAATCGTGTC
AGTCAAGAAG ACCCCATGAT GTTAGTGCAA GCTGTGCTCG AAGAGTGCTT GGGCACGGAG
TCGGCTCCAC TCAGCACCTC TGCACTGCCT TTTAAAGCCG GCGCAATGGG CTACTTTGGT
TATGATTTGG GACGACGATT CGAAGACTTA CCCCAACAGG CAGAAAACCC ATATTCTGCC
CCTGATATGG CAGTAGGGAT TTATCACTGG GCGGTTGTTA AAGACAACCA GACTGAGCAA
TTTTACCTGT GCCACTTTCC CACTGACCAC AATGACAATG CGCCTGATGC AGCGCATATA
AATGCCCTGT TGAACCATGT TGACGCAGCA TGCCCCACTG ATGATACTCA GAAATTCATC
TTAAGTGGAC AATGGCAATC CAATATGAAC AAAAGCCAGT ACGTGCATAA AATCGCGCAG
GTTAACGCTT ACCTAAGAAG TGGCGATTGT TATCAAGTTA ACCTTGCTCA ACGATTTGAC
GCCCCCTATT CAGGTGACGA GTATCAGGCG TATTTGCGAC TACGGGACGC CAACAAAGCG
CCGTTTTCAG CCTTTATTCG TATTCCTAAC GCAGTGATCA TTAGTATTTC CCCTGAACGT
TTTTTGTCGG TCGACAACCA TGGCAAAGTG CAAACGAAAC CCATTAAAGG CACTCGGCCA
CGCTCGCCGG ATCAAGCGAT AGATGAGCAA AATATTCAGG CGCTTCGAGG TTCAAGTAAA
GACCGAGCAG AGAACTTAAT GATTGTGGAT TTACTGCGCA ATGACTTAAG CAAGTCTTGC
CAACCGCACT CAGTGGACGT GCCTGCGCTA TTTGAAATAG AGAGCTTTGC TGCAGTGCAT
CATTTAGTCA GCACGGTGAC TGGTCAACTC GCTGATCAAC AGACCGCCCT GTCTTTATTA
CGTGGCGCGT TTCCCGGTGG CTCTATCACT GGAGCACCTA AAATTCGCGC CATGGAAATC
ATTGAAGAGT TAGAGCCCCA AAGACGTAAT ATTTATTGTG GCAGCATTGG ATACCTAGGT
ATTGATGGGG ATATGGACAC CAGCATATGC ATTCGTACAA TATTGCTCGA AAATTCACAT
ATTTACTGCT GGGCAGGCGG CGGAATTGTG CTAGATTCTA CCGCACTAGA CGAATATCAA
GAAAGTTTAG ACAAAGTGTG TAAAATACTG CCCGTATTAT TGCAAGGGAA CGCCTAA
|
|---|
| Protein sequence | MNRLFQHFAD QEWAILLDSA DSVHVDGRYD VIVANPLATL VTNGESTHIC FTGAPQNNRV
SQEDPMMLVQ AVLEECLGTE SAPLSTSALP FKAGAMGYFG YDLGRRFEDL PQQAENPYSA
PDMAVGIYHW AVVKDNQTEQ FYLCHFPTDH NDNAPDAAHI NALLNHVDAA CPTDDTQKFI
LSGQWQSNMN KSQYVHKIAQ VNAYLRSGDC YQVNLAQRFD APYSGDEYQA YLRLRDANKA
PFSAFIRIPN AVIISISPER FLSVDNHGKV QTKPIKGTRP RSPDQAIDEQ NIQALRGSSK
DRAENLMIVD LLRNDLSKSC QPHSVDVPAL FEIESFAAVH HLVSTVTGQL ADQQTALSLL
RGAFPGGSIT GAPKIRAMEI IEELEPQRRN IYCGSIGYLG IDGDMDTSIC IRTILLENSH
IYCWAGGGIV LDSTALDEYQ ESLDKVCKIL PVLLQGNA
|
|---|
| |