Gene Patl_1622 details

Gene Information

• Locus tag: Patl_1622
• ID: 4174051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 1928666
• End bp: 1929433
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 638054632
• Product: hypothetical protein
• Protein accession: YP_661198
• Protein GI: 109897943

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTCC CTATAATAAT TGTTCTCATC GTATCTCTCA TTGTCATGGC AATTATTGTC 
AATGCCGTGC AGCAGCACCG AAACAAAGTG GAGGCTGAGA AACGCGTAGA GGTAGCAAAA 
CAAAAAAATG TCATTGATGA AACAGAAGAG ATTTTACTCG CCACTGAGCA CATCACCGTT 
AGTCAGCAAC TGAAGTTTAT TTTTCAGCAA CGTATCGTCA ATGCCCTTAA AATTATCGCT 
CAAGTAAACC CTGGCGTAAT GGACATTAGC AGTCGTATTG AAAGTGCCAG TAATAAGCTT 
AAAGAGCTGT CAGCAAATCA AGAGCCTGTT TCGACGGATA GCTTCAACCT GCCCAATAGC 
GATAAACAAG TGGTCGCTTA CATCAAATGC GTTAAAAAAA TGCGCGGGTT GCTGCGCTCT 
GAGTACACCA AGGGCCGCGT AGACAGCAGT GCCTTTATGG TAGAAGACAA ATATTTGGAA 
CGCTTACAGC TAAGAGCGAA CGTAGAAACG CTGATGCGCC GCGGCGAATC ATCTATGCAA 
GCACAACAAC TCGGCTCTGC TCGTCAGTGT ATTGAGAAGG CGATTACGGC GTTAGACAGC 
CAATCTCAGC CAGACGATTA CATTATTCAG CGTAAGCAAG AGCTCGAACG ACAACTTAAG 
CAGATTCAAG ACAGTTTGCG CAGTGCAAAC ACTGAAGATG TGCGTAAACG AAAAGAGTCT 
GAACGCAACG AGCTTGACGA GCTATTTTCC GAAAAGAAAA AGTGGTAA 

 

Protein sequence

MIFPIIIVLI VSLIVMAIIV NAVQQHRNKV EAEKRVEVAK QKNVIDETEE ILLATEHITV 
SQQLKFIFQQ RIVNALKIIA QVNPGVMDIS SRIESASNKL KELSANQEPV STDSFNLPNS 
DKQVVAYIKC VKKMRGLLRS EYTKGRVDSS AFMVEDKYLE RLQLRANVET LMRRGESSMQ 
AQQLGSARQC IEKAITALDS QSQPDDYIIQ RKQELERQLK QIQDSLRSAN TEDVRKRKES 
ERNELDELFS EKKKW