Gene Patl_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1617 
Symbol 
ID4173871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp1924127 
End bp1924678 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID638054627 
Productnitroreductase 
Protein accessionYP_661193 
Protein GI109897938 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGCCT TAAACCTGCT GCTTAATCGT AGCTCTCATC CTAGATTACA AGCCCCTGCA 
CCGGCAGGTG AAGCATTAAC CAATATTATG CAAGCCGCAC TTCGCGCCCC TGATCATGCG 
TGTTTAGCGC CATGGCGGTT TATTGTGTGT GAAAAATCGG GCCTAGCAAA GCTGGGTGAT 
ATTTTTGAAC AAGCAGCAAT TGATGCTGAT ATGACTGAGA AAGAGATAGA GCGAGCACCT 
CAATTACCTA AGCGTGCGCC TATGGTGATC GTAGCGATTG CAAAATATGT GGAACATCCC 
AAAGTGCCTT GGGTTGAGCA GGTTGCTTCT GCCTCGTGTG CTGTGCACGC CATGCAAATG 
GCTGCAGTCG CGCAGGGGTT CAATGGAATC TGGCGTACAG GCAGTTATGC GCAAGATGAA 
AATGTTAAAC AGGCGCTTGG GTGTGCTGAA AAAGATGAAA TTGTCGGCTT TTTATACTTA 
GGAACACCGA TGACGGATGC CTCATCTAAA CCAAATCGCG ATGTGGCAGA CTTCTTTGAA 
GCGTGGAAAT AG
 
Protein sequence
MDALNLLLNR SSHPRLQAPA PAGEALTNIM QAALRAPDHA CLAPWRFIVC EKSGLAKLGD 
IFEQAAIDAD MTEKEIERAP QLPKRAPMVI VAIAKYVEHP KVPWVEQVAS ASCAVHAMQM 
AAVAQGFNGI WRTGSYAQDE NVKQALGCAE KDEIVGFLYL GTPMTDASSK PNRDVADFFE 
AWK