| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1613 |
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| Symbol | |
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| ID | 4173867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1920628 |
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| End bp | 1921752 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054623 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_661189 |
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| Protein GI | 109897934 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCAT GGATAAATAT TTACTGGTTA GGGCTAAAGG AATTGCGCAG TGTATTGAGT
GATTTCGTCA TGCTTCTACT CATTGTTTAC TCATTTAGTT TGGCGATATA CGCACAATCA
ACCGCCACAA GCGAATCAGT GAACAATGCC TCCGTGGCAA TCGTCGATGA AGACCACTCT
GCGTTGTCTC GCGCCATAGC AAATGCGTTG TACCCACCTT ATTTTAAAGT GCCAATCCTT
ATTTCAGCAT CCGAAATTGA CGATGCGATG GACAGCGATA CCTATATGTT TGTCGTTAGT
ATTCCGCCCA ATTTTGAACG CGATGTAAGA AAAGGCGAAC GACCCAGTGT GCAAATCAAT
ATTGATGCCA CGGCAGTCAC TCAAGCCAGT TTAGGCAATA CCTATATTCA AAATATCGTG
ACCGATGAGG TAAATCACTA TATCACTCGC GCTGATGAAG ACACCGAATA TCCTGTTGAA
TTGGTGCAAC GCAGAGCGTT TAATCCTAAC GGCACGGGAA TGTGGTTTGG GGCAATTAAT
GCACTGCTTA ATCAGATATC TATGCTGACT ATTATCTTAA CTGGGGCGGC GTTGCTGCGC
GAAAGAGAGC ACGGCACCAT CGAACATTTA CTGGTGATGC CACTGACCTC TTTTCAAATT
GTGATGTCAA AAGTCTGGGC AAACGGTCTT ATCATCTTGG TGTCGTTTAT GCTGTCTACT
TTTTTTGTAG TGGAATGGAT TTTGGACGTG CCCATTGCCG GCTCTCGATT CTTACTCTTT
GGTGGCACGG CATTGTATTT GCTGGCAGCT GCGGCGATAG GGATTTTTCT AGGGACAATT
GCACGTACCA TGGCACAGTT CGCCTTATTA CTGCTGATGG TCATCATACC CATCATGATG
TTGTCCGGCG GGCTAACGCC CATTGAAAGT CAACCTGAGG TGATCCAGCC AGTGACGTGG
TTACTGCCTT CACGCCATTA CATGGCATTC GCTCAAGCGG TGGTATTTAG AGGAGCGAAC
ATGACGATCG TATTACCTGA AATGCTAAAA ATTCTCGGTT TGGGATCTGC ATTTTTTATT
GCGAGCATTC TGTTATTCAG GCGTTCTATT AGCGTCAGTA AGTAA
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| Protein sequence | MRAWINIYWL GLKELRSVLS DFVMLLLIVY SFSLAIYAQS TATSESVNNA SVAIVDEDHS
ALSRAIANAL YPPYFKVPIL ISASEIDDAM DSDTYMFVVS IPPNFERDVR KGERPSVQIN
IDATAVTQAS LGNTYIQNIV TDEVNHYITR ADEDTEYPVE LVQRRAFNPN GTGMWFGAIN
ALLNQISMLT IILTGAALLR EREHGTIEHL LVMPLTSFQI VMSKVWANGL IILVSFMLST
FFVVEWILDV PIAGSRFLLF GGTALYLLAA AAIGIFLGTI ARTMAQFALL LLMVIIPIMM
LSGGLTPIES QPEVIQPVTW LLPSRHYMAF AQAVVFRGAN MTIVLPEMLK ILGLGSAFFI
ASILLFRRSI SVSK
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