| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1612 |
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| Symbol | |
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| ID | 4173866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1917817 |
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| End bp | 1920624 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054622 |
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| Product | ABC transporter related |
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| Protein accession | YP_661188 |
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| Protein GI | 109897933 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACGT CAGATTCTGC GCCATTGCTT GCAAGCTTGC AGGGAATCAA TCATAGGTAT
GGCGATGTAC GAGCGCTAAA TGACATCACG TTGGATATTC CTGCCGGCAT GATGGTGGGC
CTTCTCGGGC CCGACGGCGT CGGAAAGTCG ACATTATTAG GGCTTATTTC TGGGGCCCGA
AAATTACAAG ACGGCCAATT GCAGGTATTA AATGGAGACA TGCGCTCATC AGTCCACCGT
AAAAAGGTCG GCCCTAAAAT CGCGTATTTG CCCCAAGGTC TTGGAAAAAA CCTATACGCT
GATTTGAGCG TAGAAGAAAA CTTGGATTTT TTTGCTAAGT TATTTGGTCA AACATCGCAA
GAACGTGCTT TACGCATCAC GAAGCTCACT AAAGCCACCG GACTTGAATC ATTTTTGCAC
CGTCCGGCAG GGAAATTATC CGGTGGTATG AAGCAGAAAC TGGGGTTGTG CTGCTCTCTT
ATTCACGATC CAGACCTGCT GATCCTCGAT GAACCAACGA CTGGGGTCGA CCCCTTATCT
CGACGTCAGT TTTGGCAACT TATTGCGCAA ATTCGCTCAC AAAGGCATCA AATGAGTGTT
GTTGTGTCCA CCGCGTATAT GGATGAAGCG GAAGAATTCG ATTGGCTTGT TGCTATGGAT
GCGGGCAAAG TTCTTGCTTC TGGTAAACCA CAAGCTCTAA AAACCTCTAC CGGCACTGAT
AATCTCGAAA GTGCCTTTGT GGCGTTACTC CCACCAGAAA AACGAGGAAA TACACAAAAG
CTCGTTATTC CTCCACTTGA AGTATCAACC GAAAAACCCG CGATTATCGC CAAGGGTATC
ACCCGCAAGT TTGACGACTT TGTGGCCGTG GATGATGTAA GTTTTGAAAT AAAAGCAGGA
GAGATTTTCG GCTTTTTAGG CTCCAATGGA TGTGGAAAAA CCACGACCAT GAAAATGCTT
ACGGGTTTGT TGCCGATATC CTCAGGCAAA GCGTTTCTGT TTGGTAAAGA AGTTGACGCG
AGTGATATGC TAACCCGCAT GAGGGTGGGG TTTATGTCCC AAGCGTTTTC TTTGTACACC
GAGCTGACAG TGTATGAAAA CTTATTATTA CATGCTCGTT TGTTCCATAT ATCCAAAGAG
AAAACAGCAC AGAGAATTCG TACACTGGTA ACACGGTTTG ATTTACAATC GCAGTTGCAT
ACCAAAGCCC AGTCATTGCC CCTTGGGATC CGTCAACGTC TTTCACTTGC TGTTGCCGTT
ATTCATGAGC CTGAAATGCT CATTCTAGAC GAGCCGACCT CGGGGGTAGA TCCTGTTGCT
CGGGATGTAT TTTGGCGTTT ATTAGTGGAG TTATCACGCA GAGATAAAGT CACTATTTTT
ATATCCACTC ATTTTATGAA TGAGGCCCTA AGGTGCGATC GCATATCGCT TATGCATGCT
GGAAAGGTAT TAGTGTATGA CGAGCCTAAG CACCTTGTTG CCGCTAAACA CGCGTCTACA
TTAGAAGAAG CCTTTATTGG CTATTTAGAG GAAGCCATCG GGGAAAAAGA AGCACCTGAG
GACGAAGAAC CGAACGTGCC CTTGACCAAC ATTCCTTCTG AACCCTCGGC GTCGCTACTG
GAGCCGCTAG AGGGGGCTTC AAATGGGCCC GCAAATACGA AAAATACCGC AACAGATAGT
GTTTTCAGTC TTAAACGTAT GCTCGCTTTT AGCTACCGTG AAATCATGGA AGTGATGCGC
GACCCAGTGC GCTTAACATT TGCTTTTATC GGTAGTGCAT TGCTGTTGCT CGTGGTTTCC
TATGGTATAT CTCTTGATGT AGAGGATTTG ACCTACGCGG CCTATGACAA TGACCGTACC
CCCCAAAGTC GCGAGTATCT GAGCCATTTT GAGGGCTCGA GGTATTTTAT TGAAAAGCCG
AGTATTCAAA GTGAAGATGA TCTGCAAAGG CGTATGCAGT CGAATGAAAT TACCTTGGCG
CTGGAAATTC CTGCTGGTTT TGGTCGCTCC CTGATTAGAG GTGAAGCCCC CTCTGTTTCT
GCTTGGATCG ACGGTGCGAA TACCACGCGG GCGGGTACCA TTGAAGGTTA TGTGTCGGGT
GTGCATGTTG CGTATTTAAC CCAGCTCTTT GCTGAGCAAG GTTATGACAT AGACGATTAC
GCGAATGTAG ACCTTCAACC TAGGTACCGT TATAACCCGA CCTTTGAAAC GATTTTTTCT
ATGGGGCCTA AAACCCCAGC CATGTTGTTG TTATTGTTTC CTGCCATATT GATGGCTGTC
AGTATGGCGC GGGAAAAGGA GATTGGCACA ATAACCAATT TCTTTGTTAC GCCGACCACG
CGTTTTGAGT TTTTATTGGG TAAACAGCTG CCTTATATCG TTATCGGTAT GATTAATTTT
GTGACCTTAA CCCTGCTGGT GGTCTACCTG CTCAAAGTGC CACTAACTGG AAGTGTGACG
GGGTTGATGC TCGGCGCCTT CTTTTATGTC TTTGCAGCAA CGGGCTTTGG TTTATTGGTT
TCCTCGATCA CCAACACGCA AGTGGCTGCG GTGTTTGCTA CGGCCATTTT AACCCTGATG
CCTACCGTAA TGTTTTCCGG CATGATCCAA CCTACTTCTA CTCTGGAGGG GGGAGGGTAT
ATTATTGGTA CGTTATGGCC AGCCACCTAT TACATGCACC TGAGCGTTGC TGCATTTACC
AAGGGACTAA ATGTGTGGCA GTTGATGAAT GATATATATG TTCTTGCTAT TTTTGGGCCC
GTTTTTGTGG TGGTGACTGC GTTGTTTCTT AAAAAGCAGG AGGCCTAG
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| Protein sequence | MATSDSAPLL ASLQGINHRY GDVRALNDIT LDIPAGMMVG LLGPDGVGKS TLLGLISGAR
KLQDGQLQVL NGDMRSSVHR KKVGPKIAYL PQGLGKNLYA DLSVEENLDF FAKLFGQTSQ
ERALRITKLT KATGLESFLH RPAGKLSGGM KQKLGLCCSL IHDPDLLILD EPTTGVDPLS
RRQFWQLIAQ IRSQRHQMSV VVSTAYMDEA EEFDWLVAMD AGKVLASGKP QALKTSTGTD
NLESAFVALL PPEKRGNTQK LVIPPLEVST EKPAIIAKGI TRKFDDFVAV DDVSFEIKAG
EIFGFLGSNG CGKTTTMKML TGLLPISSGK AFLFGKEVDA SDMLTRMRVG FMSQAFSLYT
ELTVYENLLL HARLFHISKE KTAQRIRTLV TRFDLQSQLH TKAQSLPLGI RQRLSLAVAV
IHEPEMLILD EPTSGVDPVA RDVFWRLLVE LSRRDKVTIF ISTHFMNEAL RCDRISLMHA
GKVLVYDEPK HLVAAKHAST LEEAFIGYLE EAIGEKEAPE DEEPNVPLTN IPSEPSASLL
EPLEGASNGP ANTKNTATDS VFSLKRMLAF SYREIMEVMR DPVRLTFAFI GSALLLLVVS
YGISLDVEDL TYAAYDNDRT PQSREYLSHF EGSRYFIEKP SIQSEDDLQR RMQSNEITLA
LEIPAGFGRS LIRGEAPSVS AWIDGANTTR AGTIEGYVSG VHVAYLTQLF AEQGYDIDDY
ANVDLQPRYR YNPTFETIFS MGPKTPAMLL LLFPAILMAV SMAREKEIGT ITNFFVTPTT
RFEFLLGKQL PYIVIGMINF VTLTLLVVYL LKVPLTGSVT GLMLGAFFYV FAATGFGLLV
SSITNTQVAA VFATAILTLM PTVMFSGMIQ PTSTLEGGGY IIGTLWPATY YMHLSVAAFT
KGLNVWQLMN DIYVLAIFGP VFVVVTALFL KKQEA
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