Gene Patl_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1592 
Symbol 
ID4173846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1898168 
End bp1898488 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content47% 
IMG OID638054602 
Producttranslation initiation factor SUI1 
Protein accessionYP_661168 
Protein GI109897913 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAG ATAACCTTGT ATACAGTACA GATGGGGGCA GAGTTGAGAC TAAAAAAATC 
CAGCCTGCTC GCCCTCAAAC TGATGGAATT ATTAGGATCC GCCGAGAAAC CAAAGGCCGC
AAAGGTAAAG GCGTTACCAC CCTATCCGGC ATGGATATGG ACGCAACGCA GATTAAAGCC
TTGTGCTCAG AGCTAAAAAA AATGTGCGGA ACCGGTGGTG CAGTAAAAGA TGCCATTATT
GAAATCCAAG GGGATAATAG AGATAAAATT AAGCTTGCGC TGGAAAAGCG CGGCTACACT
GTAAAGCTCG CCGGCGGATA A
 
Protein sequence
MSQDNLVYST DGGRVETKKI QPARPQTDGI IRIRRETKGR KGKGVTTLSG MDMDATQIKA 
LCSELKKMCG TGGAVKDAII EIQGDNRDKI KLALEKRGYT VKLAGG