| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1588 |
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| Symbol | tyrA |
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| ID | 4173842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1894046 |
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| End bp | 1895173 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054598 |
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| Product | bifunctional chorismate mutase/prephenate dehydrogenase |
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| Protein accession | YP_661164 |
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| Protein GI | 109897909 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase |
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| TIGRFAM ID | [TIGR01799] chorismate mutase domain of T-protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACCG AACTAGAAAT ATTACGCGAC CAAATTGATA CCCTAGATTC TGAGCTAGTG
GCGCTGTTAG CAAAGCGCGC TGCGCTGACT GAACAGGTTG GTGTGTATAA AAGTAAGGTT
GGCTTGCCTA TTTATGTCCC TGCTCGTGAA GCCGAGTTGA TCGAACAGCG CTGTGAACAG
GCCAAAGCAT TAGGTGTTCC TCCTGCATTA GTCGAAGACC TATTGCGCCG AATTATGCGT
GAGTCTTATC ACACGCAAAA TAAGCGCTAT ATGTGTTGCG CTCCAAACGT TAACAATATT
GTTGTTATTG GCGGCGGCGG CGCGCTGGGG CGTATTTTTG TAGATATGTT TACCCGAAGC
GGTTACAAGG TCGATGTTCT TGAACAAAAA GATTGGCCTA GGGCCGATGA GATGTTCGCC
TCGGCAAGTT TGGTACTTGT GGCCGTACCC ATTAAGTTAA CAGAACACAT TATCGCCAAG
CTAGATAACT TGCCAACGAA TTGCATTCTT GCTGATATTA CTAGCACCAA AGCGCTGCCT
TTGGCTGCCA TGCTCAAAGC CCATAGAGGC CCAGTGGTTG GCTTGCATCC TATGTTTGGT
CCTGATGTGT CCAGTATGGT CAAACAGGTC GTGGTTGTGT GCCATGGCCG TGAAGAAGAC
AAATACCAAT GGTTATTGCA GCAGATGCGT GTGTGGGGGG CAGCATTACA GGAAACTGAT
GCTCAAGAGC ACGATGATTC AATGGTGTTT ATTCAAGTTA TGCGTCACTT CTCTAGTTAC
GTATTTGGTG CGCACCTACT GACTGAAAAC CCTTCGCTGG ATCAACTTAT CTCGCTCAGT
TCGCCAATCT ATCGATTGGA ACTGGCTATG GTTGGGCGCT TATTCGCCCA AGATCCTGCT
TTATATACGG ATATCATTTT TAACAATAAA GACAGTGTTG CCGTACTCAC TAGTTTCAGA
GATACCTTTG ATCATGCGTT AGATATGCTC AAAAAAGGTG ATAAAGGCTC GTTTATTAAA
TTATTCTTTA AGATTGGCGC TTGGTTTGGC GATTATTCAA AGCAATCGTT GGTAGACAGC
AAAAAGTTAC TTCTTAAAGC GAACGACGAT CGTACAATAA GCGAGTAA
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| Protein sequence | MPTELEILRD QIDTLDSELV ALLAKRAALT EQVGVYKSKV GLPIYVPARE AELIEQRCEQ
AKALGVPPAL VEDLLRRIMR ESYHTQNKRY MCCAPNVNNI VVIGGGGALG RIFVDMFTRS
GYKVDVLEQK DWPRADEMFA SASLVLVAVP IKLTEHIIAK LDNLPTNCIL ADITSTKALP
LAAMLKAHRG PVVGLHPMFG PDVSSMVKQV VVVCHGREED KYQWLLQQMR VWGAALQETD
AQEHDDSMVF IQVMRHFSSY VFGAHLLTEN PSLDQLISLS SPIYRLELAM VGRLFAQDPA
LYTDIIFNNK DSVAVLTSFR DTFDHALDML KKGDKGSFIK LFFKIGAWFG DYSKQSLVDS
KKLLLKANDD RTISE
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