| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1567 |
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| Symbol | |
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| ID | 4172559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1873202 |
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| End bp | 1875589 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054576 |
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| Product | peptidase S16, lon-like |
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| Protein accession | YP_661143 |
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| Protein GI | 109897888 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.617903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCTTA AATACGCTTT GAGTTTAAAA GAAATTACCG CCAAGCCAAG TCGCCGATTG
ATTAACCACG CACTTAAAGA TGACAAAGCG CTGCAAGCTA CCTTTATTGG GCAGGCGAGA
GCGCGCGAAG CATTGGACTT CGGTTTAGGC CTAGACGCCA AAGGGTACAA CTTGTATGTG
ATGGGGGAGC AAGCGACGGG CCGGTTTACC CTAGTGCATG AATATATCGC TAAGTATGTG
CAAAAGGTCC TTACGCCGGA TGACTGGTGC TACATCAATA ATTTTGAAGA CGAGCGTGAA
CCCTTTGCAT TGCGTCTCCC TCCTGGGGAA AGTAAGCGCC TCGTAAAGGA AATGGGCAAG
TTGGTGGATG AATTGCTCGA TACATTTCCC GCTGCGTTTG ATAACCCAGG CTACCAGCGC
AAAAAAGTAG CGATAACCCG AGAGTTTGAC CAGCGTTATG ATCACGCCAT TGATTCTGTT
GAGCAGCTAG CACAAGCCCA AAACGTGGCA TTGTATGAAG AAAATGGCAA TATCAGTTTT
TCACCTATTG TTGATGGGAA GCCCATCACC GATGCGGATT TTGCCAAGCT AAGTGATGAT
GAACGTCAGC GCTATTATCA GTTAATTGAT GAATTGGAAA ATCGCTTAGG CGAGGCGTTG
ATTGAGCTGC CTAAGTGGAA ACGAGCATCT TCAGAGCAGC TTAGGCATCT TAAAAAGGAC
ACAGCAGAGC AGGGCATTAA ACCCTTGCTT AAAGAATTAG AGCATCTGTA CGCGTCTGAT
TTAGGCATTT TAAAGTTTCT ACGGCAATTA AAACCCCACT TGGTCGAAAC GATAGTGGAG
ATTTTGGCAG ATGATAAAAA AGACGATAAA CACGATGAAT ACGATCGTCG TTCCGTACTT
GAAGAACAGT ATTTGCCTAA TATTCTGGTC AGCCATGCGT TAAATAGTGG CGCTCCGGTT
ATTTATGAAG CCAATCCTAC GCATCAAAAC TTGTTCGGTC GTGTTGAATA TACCAATGTC
TCAGGCTCGG TTTTTACTAA CTATCGCATG ATCCGCCCAG GAGCATTGCA CCGTGCAAAT
GGCGGTTATT TATTGCTAGA TGTCGATAAG CTGATTTTAC AACCTTATGC CTGGGAAACA
TTAAAGCTAG TCCTCAAATC TGGGTATTTG AAAATGGACT TGCCACAGCC AGATGTGGGC
ATGGTCAACT CAATCACACT TAATCCGCAA CAAATCCCCA TTAACGTTAA AGTGGTGTTA
CTTGGTTCGC GGGAGTTGTA TTACAACTTG CAAGATTTTG ATGATGAATT TTATGAAATG
TTTCGTGTAT TGGTCGATTT TGATCACGAA ATCCAGTTAG ACAAGAAAAC ACTTTATGAC
TTTGTCGGTA GAGTAAGACA TCAAGTGTCG CAATTGGGAT TGAGCAGTAT TTCACCTAAG
GCGATGTATC GCCTTGTAGA ATACAGTTTA CGTATGGCAG AGCACCAACA AAGATTGTCA
GCGCGCTTCT CAGATGTCAT CGAATTGCTC AACGAAAGTC TTTATTTCTG TCGCCAAGGT
CATGCATTAG ATTTAGATGT TACGCATATT GAAGCGGCGT TGAGTGCAAA GACGCGCCGT
ACTGGTCGCG TAAGCGAAGC GGTGCTTGAC GACATTAAAC AGGGGCAAAT TCTAATTGCT
ACCGAGGGCG TGGATGTCGG CAAGGTTAAT GGTCTTACTG TGCTTGAAGT AGGGGATAGC
TTATTCGGTA CCCCAGCGCG GATTACGTCC ACCGTGTATG CTGGGGCGAA CGGTGTAGTT
GATATCGAAC GAGAAGTCGA ACTCGGCCAG CCTATCCATT CCAAAGGCGT TATGTTGTTG
ACCGGCTATT TAGGTCATAA ATATGCCCAG CTATTTCCGC TGACCTTATC AGCCAATATC
GCCATTGAAC AATCGTACGG CCATATAGAT GGCGATAGCG CCTCGCTGGC AGAACTGGTT
GCGCTGATCT CAGCCCTGAC CAACATTCCT ACCCGCCAAG ATCTCGCCAT TACAGGCTCA
ATTAATCAGT ATGGCCAAGT CCAATCGGTA GGTGGTGTAA ATGAAAAAAT TGAAGGTTTT
TTCAAACTTT GCCAACACCG AGGATTAACC GGAAACCAAG GGGTGATTAT TCCTAAGTCG
AATCAGATTT CCCTTATGTT AGATAAAGAG GTTGTTGCGG CGGTGAAGCT GGGAAAATTT
CATATCTGCG TCGTGGAAAC AGTCGATCAA GCACTTGAGT TATTAATGAA CAAAGAAGCG
GGAGTGATGA ACACTAAAGG GCGTTACCCT AAGGGCACGA TTAATTATAT GGCAGTGAGT
AGTTTGCTTA ACATCGCTAA TGTGGTGAAT GGCGCAGATG ATGAATAG
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| Protein sequence | MHLKYALSLK EITAKPSRRL INHALKDDKA LQATFIGQAR AREALDFGLG LDAKGYNLYV
MGEQATGRFT LVHEYIAKYV QKVLTPDDWC YINNFEDERE PFALRLPPGE SKRLVKEMGK
LVDELLDTFP AAFDNPGYQR KKVAITREFD QRYDHAIDSV EQLAQAQNVA LYEENGNISF
SPIVDGKPIT DADFAKLSDD ERQRYYQLID ELENRLGEAL IELPKWKRAS SEQLRHLKKD
TAEQGIKPLL KELEHLYASD LGILKFLRQL KPHLVETIVE ILADDKKDDK HDEYDRRSVL
EEQYLPNILV SHALNSGAPV IYEANPTHQN LFGRVEYTNV SGSVFTNYRM IRPGALHRAN
GGYLLLDVDK LILQPYAWET LKLVLKSGYL KMDLPQPDVG MVNSITLNPQ QIPINVKVVL
LGSRELYYNL QDFDDEFYEM FRVLVDFDHE IQLDKKTLYD FVGRVRHQVS QLGLSSISPK
AMYRLVEYSL RMAEHQQRLS ARFSDVIELL NESLYFCRQG HALDLDVTHI EAALSAKTRR
TGRVSEAVLD DIKQGQILIA TEGVDVGKVN GLTVLEVGDS LFGTPARITS TVYAGANGVV
DIEREVELGQ PIHSKGVMLL TGYLGHKYAQ LFPLTLSANI AIEQSYGHID GDSASLAELV
ALISALTNIP TRQDLAITGS INQYGQVQSV GGVNEKIEGF FKLCQHRGLT GNQGVIIPKS
NQISLMLDKE VVAAVKLGKF HICVVETVDQ ALELLMNKEA GVMNTKGRYP KGTINYMAVS
SLLNIANVVN GADDE
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