| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1560 |
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| Symbol | |
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| ID | 4172552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1864779 |
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| End bp | 1866710 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054569 |
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| Product | peptidoglycan glycosyltransferase |
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| Protein accession | YP_661136 |
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| Protein GI | 109897881 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR03423] penicillin-binding protein 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCGTC ATCGTGTAAC GATTAAAGAC CACACCGCTG AAGCAAACCT TTTTGCTCGG
CGTACGGTCA TCGCTATGTT GGTCATTTTC ATGATGATTG CCATGGTATT GAGCAACCTA
TACTACCTGC AAATCACCCG CTTTGAAGAT TATCAAACGC GCTCTAATGG CAATCGCATA
AAAATATTGC CAGTCGCGCC GAACCGCGGG TTAATTTACG ACAGAAATGG CACTCTGTTG
GCTGAAAACC GTCCCGTTTT CAACTTGGAA GTCATTCCTG AAAAGGTAGA TAATTTAGAG
AGAACGCTTG GCCTGTTGAG CGTATTACTC GATGTGGACG AAGACGAAAT CACCGACTTT
TATCGAGAAA TAAAACGCAA TCGACGCTTC AAACCCGTGT CTTTGCGTAA ACGTTTGACT
CCAGAAGAAG TCGCCCTTTT TTCTGCCAAT CAACACAAGT TCCCAGGAGT GAGTGTAGAA
GCTCGCTTAA CACGACACTA TCCATACGGA AAAACATTAA CCCATGTACT GGGTTACGTA
TCAAAAATTA ATAAAAAGGA TCTACAAAAG CTTAGCGAAG CAGGCCTTGA AGCAAATTAT
GCCGCAACCC ATGACATAGG AAAACTTGGG GTTGAAAAGT ACCACGAAGA TATTCTGCAT
GGTCAGGTAG GTTATCAAGA GGTAGAGGTC AACAACCAAG GGCGCGTGAT CCGCACGCTC
AACTTTAGCC CTCCCGTTCC AGGGCAAGAT ATCGTCCTAA ATATCGATTT GAAACTGCAA
CAAGAAGCAG AGCGCATTTT AGATGGTGAC AAGGGTACCA TCGTAATGCT TGATTCAGAT
GACGGTGGTG TGTTGGCCAT GTTCAGTAGC CCTAGCTACG ACCCCAACTT ATTCGTTCAC
GGTATTAGCA GTAAAAATTA CAGCGCGTTA TTAAATTCAA ATGGGCGCCC ACTGATTAAC
CGCGCCACGC AAGGTCAGTA TCCTCCAGCT TCAACCATAA AGCCTCATTT AGCCTTAGTT
GGCCTAGAAG AGAACACAGT GACCCCAAAA ACGCGCATTT TCGATAACGG CAAATATCGC
CTAAAAAATG TAGAACACGT GTGGCGAGAC TGGAAACGCT GGGGACATGG GTGGGTTGAT
TTAACCTCAG CCATAGAACA ATCCTGTGAC ATCTACTTTT ACGATCTGGC TTATCGGTTA
GGTATCGATA AAATCAGCGA TAACATGTTT GAATTTGGTT TCGGCGATTA CACCGGCATA
GATTTACACG AAGAGTCAGA TGCAAACATG CCCAGCCGTG GCTGGAAGCG TGCTCGATTC
AATCAACCCT GGTACATCGG CGATACCATT CCCGTGGGCA TTGGCCAAAG TTATTGGACC
GTCACTCCTA TCCAATTGAC ACAATCTATC ACCACCTTAG TCAATCACGG ACATCGTTAT
ATTCCGCAGA TATTGCGCGG AAAATACGTT AACAGTGAAG TGGTTCTTGA GGGCAGCAAA
GAGCGCCGCC CGATGGACAT TAAAAATGAC AAAAACTGGG ACACTGTACT AGATGCCATG
TACGGCGTAG TTAACCGCAA AACCGGTACG GCTCGTCGTG CGTTTGTTGA TACACCCTAT
GTGTCGGCAG GTAAAACCGG TACAGCACAA TTGGTGGCCA TCGCCCAAGA TGCAAAATAT
GATGCCGAGA GCTTGGCTGA AAACTTGCGC GACAATGCCA TGTACGTGGG TTTTGCGCCC
TACGAAAAAC CGGAAATTGC CGTTACCGTG GTGCTTGAAA ATGCCGGTGG CGGTAGCTCA
CAAGCCGCTC CTTTGGCCAG AATGATGATG GATAAATACT TTGAAGAGCG AGAGTTTGCG
CCTAAACCAG ACGTAAAAGA ACGGGAAGTA TCGCAAGATG TCGCCCATCA AACCACTTCA
CACACTCATT AG
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| Protein sequence | MARHRVTIKD HTAEANLFAR RTVIAMLVIF MMIAMVLSNL YYLQITRFED YQTRSNGNRI
KILPVAPNRG LIYDRNGTLL AENRPVFNLE VIPEKVDNLE RTLGLLSVLL DVDEDEITDF
YREIKRNRRF KPVSLRKRLT PEEVALFSAN QHKFPGVSVE ARLTRHYPYG KTLTHVLGYV
SKINKKDLQK LSEAGLEANY AATHDIGKLG VEKYHEDILH GQVGYQEVEV NNQGRVIRTL
NFSPPVPGQD IVLNIDLKLQ QEAERILDGD KGTIVMLDSD DGGVLAMFSS PSYDPNLFVH
GISSKNYSAL LNSNGRPLIN RATQGQYPPA STIKPHLALV GLEENTVTPK TRIFDNGKYR
LKNVEHVWRD WKRWGHGWVD LTSAIEQSCD IYFYDLAYRL GIDKISDNMF EFGFGDYTGI
DLHEESDANM PSRGWKRARF NQPWYIGDTI PVGIGQSYWT VTPIQLTQSI TTLVNHGHRY
IPQILRGKYV NSEVVLEGSK ERRPMDIKND KNWDTVLDAM YGVVNRKTGT ARRAFVDTPY
VSAGKTGTAQ LVAIAQDAKY DAESLAENLR DNAMYVGFAP YEKPEIAVTV VLENAGGGSS
QAAPLARMMM DKYFEEREFA PKPDVKEREV SQDVAHQTTS HTH
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