| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1559 |
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| Symbol | |
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| ID | 4172551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1863639 |
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| End bp | 1864763 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054568 |
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| Product | rod shape-determining protein RodA |
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| Protein accession | YP_661135 |
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| Protein GI | 109897880 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0999879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATGA TGCTACGCAC CAAGCTTGAC CCCAATAAGC GTTCTTTGCT CAATCGCATA
CATTGTGACG GGCCGCTACT CATCGGGTTG CTGGTACTGA TGGCCGTTGG CTTAGTAACT
ATATATTCTG CCGGGGGCCA AGACTGGCAA CTCATTGACC GTCAACTTAT TCGACTCGGG
TTGGCGCTTG GGGTCATGTT GGCCGTGGCG CAAATTCCAC CGTTAGCCTA CCAAAAGTTA
TCTATTTATT TTTATATACT CGGGATCGCC ATGTTGGTTG CGGTGATCGT ATTCGGCCAT
GTAGGAAAAG GCGCTCAGCG CTGGTTGGAC TTAGGGGTAG TGCGTTTTCA ACCTTCAGAA
ATCATGAAGC TTGCCGTTCC CATGATGGTG GCTTGGTACA TCAGTCAATT TAACCTTCCC
CCGAAATTAA GGCACATATT ATTTGGCTTT ATTTTGGTAG GCGTTCCCAC GTTGTTGATT
GCGCAACAAC CTGATTTAGG CACCTCTTTA TTAATTGCCA GCTCAGGGAT ATTCGCACTA
TTCCTTGCTG GTATGAGTTG GCGCTTCATC GGAGGTATTG CCTTAGCGGT ATCCATATTC
AGCCCTATCA TGTGGAACTT CCTCATGAAG GACTATCAAA AACAACGAGT ATTAACCTTC
CTCAATCCAG AAAGCGACCC ATTAGGGTCT GGCTACCATA TTATTCAATC ACAAATTGCA
ATAGGCTCAG GCGGCGCCGA GGGTAAGGGG TGGTTGCAAG GCACTCAGTC TCAATTAGAA
TTTTTACCCG AGCGACATAC AGATTTTATT TTTGCAGTAT TTAGTGAAGA ATTTGGTTTT
TGGGGCGTGG TCGGCTTATT GGCCATTTAT ACTTTCATCG TTATCCGCGG CATGATCATC
GCAAACCGCG CTCAAGATGC CTTTAGTAAG CTACTCGCAG GCAGTATTAC GCTAACATTC
TTTGTTTATG TATTTGTTAA TATGGGTATG GTATCGGGCA TACTACCCGT AGTCGGTGTG
CCCTTGCCGC TCGTAAGCTA TGGAGGGACA TCCATGGTCA CCTTACTCGC AGGGTTTGGC
ATTTTAATGG CCATCGCCAC CCAGAAACGG TTATTGTCCC GTTAA
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| Protein sequence | MNMMLRTKLD PNKRSLLNRI HCDGPLLIGL LVLMAVGLVT IYSAGGQDWQ LIDRQLIRLG
LALGVMLAVA QIPPLAYQKL SIYFYILGIA MLVAVIVFGH VGKGAQRWLD LGVVRFQPSE
IMKLAVPMMV AWYISQFNLP PKLRHILFGF ILVGVPTLLI AQQPDLGTSL LIASSGIFAL
FLAGMSWRFI GGIALAVSIF SPIMWNFLMK DYQKQRVLTF LNPESDPLGS GYHIIQSQIA
IGSGGAEGKG WLQGTQSQLE FLPERHTDFI FAVFSEEFGF WGVVGLLAIY TFIVIRGMII
ANRAQDAFSK LLAGSITLTF FVYVFVNMGM VSGILPVVGV PLPLVSYGGT SMVTLLAGFG
ILMAIATQKR LLSR
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