| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1558 |
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| Symbol | |
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| ID | 4172550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1862470 |
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| End bp | 1863588 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054567 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_661134 |
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| Protein GI | 109897879 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000667171 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGTCAC TTTGTGGAGC TAATGTGTCG TTCTCAACCT TATGTAATCG TCTTTTTCGC
CGCGTACCCC ATGTATTGCT CGCTCTTCAT CTAATAGTAT TGGCACCAAT AAGTAGTGCA
CAATCTCTGC CTGAGGCAGA AACTGCCTTC TTGGACGCCA TAGTAACAAA GCACAATTTA
AATCGCGAAA CGGTGCTGCA GTTACTTAAC CAAGCTGAAA AAGACCAAGC AGTGATCGAT
GCGATAAAAC GACCTTGGGA AGCAAAGCCT TGGCATCTGT ATTACCCCAT ATTTTTGACT
GAGAAAAGAC TACAAAAAGG CCTCGAATTC TACCAAGCTC ACGGGGAAAC ATTGGCCCGC
GCAGAGAAAG AATATGGTGT ACCAGCAGAG ATGATCGTCG CTATTTTAGG TATCGAGTCC
TTTTATGGTA CCTACAAAGG TAGCTACGCA GCGCTCAATG CCCTCTACAC TCTGGGCTTT
CACTATCCGC CCCGGTCCTC ATTTTTTAAA AAAGAATTGG CTCAGTTAAT ATTGTTAGCG
AATGAAGAGG AGTTTGATGC CAAGCAGTTA CAAAGCTCTT ATGCAGGCGC TATGGGCTGG
GGGCAATTCA TTCCATCTAG TTATCGCCAT TATGCAGTTG ATTTTGACAA TGACGGCGTA
CGCGATTTAC TGAATAATCC AGTGGACGCT ATTGGCAGTA TCGCCAATTA TTTTAAACGT
AACGGCTGGC AACGAGGTGA TTCGATTGCT TTTCCAGTAA ACGTAACGCC TGAAAACGCA
AAGCCTTGGT TAAGAAAATC TCTTAAGTAT CGTGAGACCT TTGCCCAGTT GCAACAAGCA
GATATTAGCC TTGATGTCGA AACAGCTAAG CGCGTCGGGG TCGAAAAAGC TCAAGATAAG
TGGGATGGTA TCGCAGCTGA TAGTGACGCT AAATTACTTG ATTTTGCCCA AGCTAGCGGG
CACGACTATT GGCTTGGATT GAAAAATTTT TACGTGATCA CTCGCTATAA CCACAGCAAA
TTGTACGCAA TGGTCGCGTT TCAATTTAGC CGACAATTAG CCAGCGGCAT CAACTCGTTA
GACAAAGACG CACAACTGAG TCCACAAGAT GATGCTTAA
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| Protein sequence | MLSLCGANVS FSTLCNRLFR RVPHVLLALH LIVLAPISSA QSLPEAETAF LDAIVTKHNL
NRETVLQLLN QAEKDQAVID AIKRPWEAKP WHLYYPIFLT EKRLQKGLEF YQAHGETLAR
AEKEYGVPAE MIVAILGIES FYGTYKGSYA ALNALYTLGF HYPPRSSFFK KELAQLILLA
NEEEFDAKQL QSSYAGAMGW GQFIPSSYRH YAVDFDNDGV RDLLNNPVDA IGSIANYFKR
NGWQRGDSIA FPVNVTPENA KPWLRKSLKY RETFAQLQQA DISLDVETAK RVGVEKAQDK
WDGIAADSDA KLLDFAQASG HDYWLGLKNF YVITRYNHSK LYAMVAFQFS RQLASGINSL
DKDAQLSPQD DA
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