Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1557 |
Symbol | |
ID | 4172549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1861515 |
End bp | 1862480 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638054566 |
Product | rare lipoprotein A |
Protein accession | YP_661133 |
Protein GI | 109897878 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000368198 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCTTA AGTACGCGTT TTTAATCATG CTGGTCACAT TCATAGCGGC CTGCGCCAAT TCGCCGAGTT CAAATAGCAG CCGCTACAGC CAGCATAAAG ATTCCGCTCC CAGCGCGATT AGAGGTGGAA TAAAGTTTGA TGATGCCGAA CCTATGTATG AACCCTACGC CCTTGCGAAT TTGCGCAGCT ATTCAGTTTT AGGCAAGCAG TATACCCCTC TTAAAACCGG TAAAGGATAC TCAGCTACTG GCGGCGCTTC TTGGTATGGC CAGAAATTTC ATGGGCATCT CACGTCCAAC GGTGAAACCT ACGACATGTA CGCCATGAGT GCTGCTCATA AAACATTGCC ACTGCCATCG TACGTAAAAG TGACAAACCT AAAAAATGGC CGCGAAGCCA TAGTCCGGGT AAACGACCGA GGCCCGTTTC ATGACAAAAG AATAATTGAT TTATCTTATG CAGCTGCAAT GAAACTCGGT ATGTTAAGTA CAGGCACTAC CCAAGTTAAA CTAGAGGTCA TTCATATTGA CGAAGCAGGT ATGCAGACAG TGGGTGACGG TTTATCTGAG CCACCTACTC CGTTAAAAGA TGATGCTATG CGTAACGACA ATGTACAAAT CGCCCAAGTG CCCCGCGTAC CGGCTTTAGG TACAACATCG GCTACATCAC CAAACTCAGC CAGTGTCGCA TCTGCGCCGC CTATAGCGAC ACCTACAGAA ATACCCACCC AAGAAAAGGT ATTCATTCAA ATAGCAGCCC TGAGTAACGA TCAGCGAATT ACCAAAATTG GTAACGCCCT GGCAAATTTG TATCAAGTGC CTTTTGTTGC ACCACTTGAA GAAGGATTAT ATCGCTTAAG ACTTGGGCCA TTTACGTCCG AGCACGAAGC ATTGGGGATC TTAAATCAGC TGCGTAAAAG CGGATATAGC GACGCTTACA AGTTTTATCC TTCGAATGAG CCCTAG
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Protein sequence | MMLKYAFLIM LVTFIAACAN SPSSNSSRYS QHKDSAPSAI RGGIKFDDAE PMYEPYALAN LRSYSVLGKQ YTPLKTGKGY SATGGASWYG QKFHGHLTSN GETYDMYAMS AAHKTLPLPS YVKVTNLKNG REAIVRVNDR GPFHDKRIID LSYAAAMKLG MLSTGTTQVK LEVIHIDEAG MQTVGDGLSE PPTPLKDDAM RNDNVQIAQV PRVPALGTTS ATSPNSASVA SAPPIATPTE IPTQEKVFIQ IAALSNDQRI TKIGNALANL YQVPFVAPLE EGLYRLRLGP FTSEHEALGI LNQLRKSGYS DAYKFYPSNE P
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