| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1555 |
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| Symbol | |
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| ID | 4172547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1859882 |
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| End bp | 1860145 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054564 |
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| Product | hypothetical protein |
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| Protein accession | YP_661131 |
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| Protein GI | 109897876 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2921] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000623107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAACCC AATTTGATAA ATTACTCGAC TTCCCTTGCC ACCAAACCTT CAAGGTCATG
GGTGTAGCGG ATGAACGGTT ACCGGATCAT GTCATCAACT GCTTGCAAAA CCATGCACCT
GGTGACTATT CCCCCAGTGT AAAACCGAGC TCAAAAGGCA CTTACCATTC GTTGTCTATC
AGCGTGCGTG TAACGAGCAA AGAGCACATG GAAACCATCT ATACTGAGCT TTCTAAGCTT
GAATTGGTTC GTGTAGTTCT CTAA
|
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| Protein sequence | MQTQFDKLLD FPCHQTFKVM GVADERLPDH VINCLQNHAP GDYSPSVKPS SKGTYHSLSI
SVRVTSKEHM ETIYTELSKL ELVRVVL
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