Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1553 |
Symbol | |
ID | 4172545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1858212 |
End bp | 1859174 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638054562 |
Product | lipoyl synthase |
Protein accession | YP_661129 |
Protein GI | 109897874 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.108222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACG CACGTCCACA AGCCGGAGAA AAACTCCGGG ATGATGAAAA AGTTAAACAT ATTCCGATCA CTATCATGCC CACTGAAAAG GCAGAGATGT TGCGCAAACC AGAGTGGATT AAAATTCGCT TACCGCGCAC CACGGATCGT ATCGATCATA TTAAAAAGAC ATTGCGTAAA AACAATTTGC ACTCGGTGTG CGAAGAAGCA AGTTGCCCCA ACCTTGCTGA ATGTTTTAAC CATGGTACTG CGACCTTTAT GATTTTGGGC GATATATGCA CCCGTCGCTG CCCGTTTTGT GATGTTGCTC ATGGCAAGCC ACTGCCTCCA AGTGCAGAAG AGCCTGTCAA ATTAGCCAAG ACCATCGCTG AAATGCAACT TAAGTATGTG GTTATCACCT CTGTGGATCG CGATGATTTA CGTGACGGTG GCGCCCAACA CTTTGTTGAT TGCATAAACG CTATTCGCGA GCACAGTCCA ACGACTAAAA TTGAAGTACT TGTACCCGAT TTTCGCGGTC GTATGGACAA AGCATTAGAG ATCCTTAAAA ACGGCGTGCC AGATGTGTTT AATCATAATT TGGAAACCAT CCCTCGCCTT TACCGTGAAT GTCGCCCTGG GGCAAACTAT CAGTGGTCAC TTGATTTGCT TAAGAAATTC AAAGAACAAC ATCCTGATAT CCCCACCAAA TCAGGCTTAA TGATGGGCAT GGGCGAAAAC AAAGAAGAAA TCGCAGAAGT ACTTAAAGAC TTACGCGCAC ACAATGTTGA GATGCTTACC CTTGGTCAGT ACCTACAACC GAGTAAGCAC CACTTCCCAT TAAAGCGTTA TGTGCATCCT ACGGAGTTTG ACGAGCTTGG CGTGATCGCG AAAGAGATCG GCTTTACTCA CGCAGCATGT GGCCCTATGG TGCGTTCAAG CTACCATGCT GATAAGCAAG CAGCCGGTGT AGAAGTTAAG TAA
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Protein sequence | MSNARPQAGE KLRDDEKVKH IPITIMPTEK AEMLRKPEWI KIRLPRTTDR IDHIKKTLRK NNLHSVCEEA SCPNLAECFN HGTATFMILG DICTRRCPFC DVAHGKPLPP SAEEPVKLAK TIAEMQLKYV VITSVDRDDL RDGGAQHFVD CINAIREHSP TTKIEVLVPD FRGRMDKALE ILKNGVPDVF NHNLETIPRL YRECRPGANY QWSLDLLKKF KEQHPDIPTK SGLMMGMGEN KEEIAEVLKD LRAHNVEMLT LGQYLQPSKH HFPLKRYVHP TEFDELGVIA KEIGFTHAAC GPMVRSSYHA DKQAAGVEVK
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