| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1536 |
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| Symbol | |
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| ID | 4172985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1842674 |
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| End bp | 1843498 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054545 |
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| Product | phosphonate ABC transporter, periplasmic phosphonate-binding protein |
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| Protein accession | YP_661112 |
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| Protein GI | 109897857 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC GTTTTCTAGG CTGTATTTTT TTATTCTGCG CTTTAACCAC ATTGCCAGCT
TTGGCCGCTG AAAAGCAGTC ACAGCAAGCA TTAACCTTTG CTGTTGTGCC TCAACAATCA
GCGAAAAAAC TAGCCAAGTT GTGGACCCCA CTATTAAAGG AAATAAGTGC AACTAGTGGG
GTTGAACTTG TATTTACTAC GGCACCCAAT ATCCCCATAT TTGAACAACG TTTAGAGCGT
GGTGAATACG ACTTTGCTTA TATGAACCCG TACCATTTTA CTGTGTTCAA CCAAACGGCA
GGCTACCACG CGCTAGCAAA GCAAAGAAAT AAATCTATTC AGGGGATCAT CGTGGTCAAA
CAAGACTCCC CCATCACAAC CCTGCAGCAA TTAGAAAACC TGACCTTGGC ATTTCCTGCT
CCTGCGGCAT TTGCTGCCAC GCTTTTGCCT AAAGCTGACT TACAAGCTCA AAATATACTG
ATTGAAAGCC GCTACGTATC CTCTCACGAC TCTGTTTACC TTGCTGTCGC AAGAGGTTTG
CTGCCTGCAG GAGGCGGCAT TATGCGTACG TTCAATAATG CACCAGAGCA AGTCAGAGAT
AGCCTGCGAG TCCTTTGGAA AACCAAAGCG CACACGCCTC ACGCCATTGC TAGCCACATG
AGTGTCCCGT TGGAGGTTCG TGAACGAGTA CTACAAAGTT TACTTAGCCT AGACAAAACA
AAACAAGGAA AGGGTCTGCT AAAAACCATT AACTTTAGCG CTTTTGAAAG CGCAGAAGAT
AATGACTGGG ATGACATTCG GGCCTTGGGC ATTAAAACGC TTTAA
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| Protein sequence | MKKRFLGCIF LFCALTTLPA LAAEKQSQQA LTFAVVPQQS AKKLAKLWTP LLKEISATSG
VELVFTTAPN IPIFEQRLER GEYDFAYMNP YHFTVFNQTA GYHALAKQRN KSIQGIIVVK
QDSPITTLQQ LENLTLAFPA PAAFAATLLP KADLQAQNIL IESRYVSSHD SVYLAVARGL
LPAGGGIMRT FNNAPEQVRD SLRVLWKTKA HTPHAIASHM SVPLEVRERV LQSLLSLDKT
KQGKGLLKTI NFSAFESAED NDWDDIRALG IKTL
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