Gene Patl_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1452 
Symbol 
ID4173609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1746252 
End bp1747838 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content45% 
IMG OID638054462 
Productcytochrome bd ubiquinol oxidase, subunit I 
Protein accessionYP_661029 
Protein GI109897774 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.41499e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATG AAACCTTTGT GGATCTATCG AGGTTACAGT TTGCGATCAC CGCACTGTTT 
CATTTTTTAT TTGTGCCTCT AACACTGGGT ATGACGTGGA TTTTGGTCAT CATGGAGTCG
GTTTTTGTTA TGACCGGCCG ACAAATTTAT CGCGACATGA CTAAGTTTTG GGGCAAGCTA
TTCGGAATCA ACTTTGCCAT AGGGGTTGCC ACTGGGCTAA CTATGGAGTT TGAGTTCGGC
ACCAATTGGT CGTACTACTC ACACTATGTA GGTGACGTGT TTGGTGCGCC ATTGGCGATA
GAGGGCTTAA TGGCTTTCTT TTTAGAATCG ACCTTTGTAG GTATGTTCTT TTTAGGCTGG
GACAGACTAA CGCGCCGTCA ACACTTAGGC GTAACGTTCT TAATGGCGGT AGGCACTAAT
CTATCTGCAT TGTGGATTTT GATTGCCAAC GGTTGGATGC AAAACCCCGT CGGCGCGGAA
TTTAACTATC AAACCATGCG TATGGAAATG ACTAGCTTTG CTGAGCTGGT GTTTAATCCC
GTGGCGCAGG TTAAGTTTAT TCATACTGTT TCCGCCGGTT ATGTTGCTGC GTCAATGTTT
GTGCTTGGGA TCAGCAGTTA TTATATTCTA AAAGGACGTG ATGTTTCTTT TGCCAAACGT
TCATTCTCGG TGGCAAGTGG CTTCGGCTTG GCGTCAATAT TGTGTGTTAT TTTACTAGGT
GATGAGTCTG GTTACGAAGT GGGTGAAGTA CAAAAAGTGA AACTGGCGAC TATCGAAGCT
GAGTGGCACA CAGAAGAAGC ACCAGCGGCG TTTACCATGT TTGGCTTCCC TGATTCAGAA
GAGCAAGTAA CTCATGCTGC TATTAAAATA CCCTATGCGT TAGGCATCAT TGCTACGCGC
TCATTAGATG AAGAAGTGGA GGGGATAAGC GATTTAGAGA AAAACCATGA AAAACGTATT
CGTAACGGCA TGTTGGCTTA TGCGTACCTC GATAAACTTA GAAATGGTCA AGACACACCT
GAAAACATCG CCACGTTTGA TGAGCTAAAA GCCGATTTGG GTTATGGCTT ATTGCTCAAG
CGTTACACGC CAAATGTGGT TGATGCCACG GAAGAAAATA TTCAACAAGC GGTGAAAGAC
TCCTTCCCTA AAGTGGGCCC GATGTTTTGG TCATTTAGGA TCATGGTGGC CTGTGGTGTG
GCTATGCTCG TCGTATTTGT ACTGGCTTTT TACTATAACG CGCACCGGGT TATCGAACAG
AAACGTTGGT TATTGTGGGC GGCGGTATTC AGTATTCCAC TGCCATGGAT AGCCATTGAA
TTCGGCTGGG TGGTCGCAGA ATACGGCAGA CAACCTTGGG CAATTTCAGA GATTTTACCC
ACGTTCTTGG CAACCTCGTC ATTGACCACA AACGACTTGA TCATGAGTAT TGCTGGGTTT
GTCATCTTTT ATACCGGCTT GGCAATCGTC GAAGGTTGGT TAATGCTGAG ATTTGTTAAG
CAAGGGCCGA GCTCATTGCA CACCAATAAA TATCATTTTG AAAAGATTTA CCAAGAACCG
GCTGAAGAAC AAGGAGCGCA ATCATGA
 
Protein sequence
MIDETFVDLS RLQFAITALF HFLFVPLTLG MTWILVIMES VFVMTGRQIY RDMTKFWGKL 
FGINFAIGVA TGLTMEFEFG TNWSYYSHYV GDVFGAPLAI EGLMAFFLES TFVGMFFLGW
DRLTRRQHLG VTFLMAVGTN LSALWILIAN GWMQNPVGAE FNYQTMRMEM TSFAELVFNP
VAQVKFIHTV SAGYVAASMF VLGISSYYIL KGRDVSFAKR SFSVASGFGL ASILCVILLG
DESGYEVGEV QKVKLATIEA EWHTEEAPAA FTMFGFPDSE EQVTHAAIKI PYALGIIATR
SLDEEVEGIS DLEKNHEKRI RNGMLAYAYL DKLRNGQDTP ENIATFDELK ADLGYGLLLK
RYTPNVVDAT EENIQQAVKD SFPKVGPMFW SFRIMVACGV AMLVVFVLAF YYNAHRVIEQ
KRWLLWAAVF SIPLPWIAIE FGWVVAEYGR QPWAISEILP TFLATSSLTT NDLIMSIAGF
VIFYTGLAIV EGWLMLRFVK QGPSSLHTNK YHFEKIYQEP AEEQGAQS