| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1432 |
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| Symbol | |
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| ID | 4173589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1722055 |
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| End bp | 1722735 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054442 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_661009 |
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| Protein GI | 109897754 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.411004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAG AAAAAGTCGT ATTAATTACC GGCGCATCCA GTGGTATCGG CGAGATGACA
GCCAAAATAT TGGTCCAAAA TGGCCACAAA GTAGTGTTGA CCGCTAGAAG ACAAGAAAAG
TTAGATGAAT TAGTCGATTA CCTCGGCGCT GACCATGCTA TTGCAGTCGC CGCAGATGCC
ACCGATATTC ACGAGCTTGA GAAAGTGGTA AAAGAAGGAA TCAACAAATT TGGTCGACTG
GATGTGGCGT TTGCCAATGC TGGCATGGGT GTGTCTACAT CTGGCACAGA GAAAGGCGAT
CCCGACGAGT GGGATACCAT GATCCAAATT AACATCAATG CTTTACTCTA CACCGCTAAG
CTCACGTTAC CTCACCTAAG GGAGTCTGTA GGGCAGTTTA TCATTACCAG CTCAGCGGCT
GGCAGACGTC CCATTAAAGG TTCGATTTAC GGTGCAACTA AATGGTTTGC CTATGGGTTT
GGGCAAAATT TAGCAGAAGA AATGGCAGAA TGGGGCGGCC GCTGCACAAC TATTGCCCCA
GGCATGGTTA ATACACCATT TTTCGATGAA GAAAAGCCAG ACAAACTCGC TCCTGCAGAT
GTAGCCGATG CCGTGCTATT TGCCGTGGAG GCTGATAAGC GAAATTGCGT TCGCGAGATA
TTCTTAATGC CAACAAACTA G
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| Protein sequence | MAKEKVVLIT GASSGIGEMT AKILVQNGHK VVLTARRQEK LDELVDYLGA DHAIAVAADA
TDIHELEKVV KEGINKFGRL DVAFANAGMG VSTSGTEKGD PDEWDTMIQI NINALLYTAK
LTLPHLRESV GQFIITSSAA GRRPIKGSIY GATKWFAYGF GQNLAEEMAE WGGRCTTIAP
GMVNTPFFDE EKPDKLAPAD VADAVLFAVE ADKRNCVREI FLMPTN
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