| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1431 |
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| Symbol | |
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| ID | 4173588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1720632 |
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| End bp | 1721882 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638054441 |
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| Product | lyase precursor-like |
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| Protein accession | YP_661008 |
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| Protein GI | 109897753 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4257] Streptogramin lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000675912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCATC TAGCGAAAGC CATTTTTACC CTAGGATTAA CCCCTGTACT GAGCCCAGGG
TCTCTGTTTG CACAGTCTTT GCCAGATACA TCTGGCAAAG ACTTGGTTGA AGCCCATTGC
AACGCCTGTC ATACCAGCGA GCGTATTGTA TCTAGCGCTG GCTACAACCA AACGGGTTGG
CAACATTTGA TTGCCACCAT GGTCAATTTA GACGGCAATC CCAAGCGTGA AAAAATCACT
GCCTATTTAG CCGAACACTT TCCTCCAACG TCACATCGCA ACCCGCAACT AGTGGAGGGC
GATACCTCTG TTACATTTGA AGAATGGGTG GTACCCACAT TGGGCCAGCG TTCCCGAGAC
CCGATTGAAG CGCCAGATGG TTCGATTTGG TGGGCTGGCC AGTGGGGGAA CCTCATTGGG
AGCATAAATC CACAAACCGG TGAGATGCGT GAATACCCCT TGCCGGCTAA CGCCATGCCA
CACACCGTCA CCCACGACAG GAGAGGTAAC ATTTGGTACA CAGGCAACAA GAACGGTACA
TTGGGTATGC TCAACCCGCA AACAGGTGAG ATCACCGAAT ATAAAATGCC CGACTCGCAC
GCGAAAGACC CCCACTCAGC TATATTTGAT GACAACGGCA CACTGTGGTT TACCTTGCAG
CACAGCAACA TGATTGGCCG CTTGATACCC AGCACGGGGG AAATCAAATT AGTCACCATG
CCCACCCAAG ACGCTCGCCC TTACGGCATT AAAATTGATA GCAAGGGTAC ACCTTGGGTG
GCGTGCAATG GTAGTAATTG CTTAGTCAAA GTAGACCCTT CAACCATGGC AATCAGTGAG
TACCCACTGC CAAATGAAAA CACCACCGTC AGACGCCTTG ACATCGCAGA TGATGGCATG
ATCTGGTACG TTAATTCAAG GCGTGGTCGC TTAGGTCGAC TCAACCCTAA CAATGGCGAA
GTCAAAGAAT GGCCATCCCC CAGCGGGCCA AACTCACACC CCTACGCTAT CGCAGTCATT
GGTGATGCCA TTTGGTACAA CGAATCAGGT AAACGCCCTG ATGCCTTAGT TCGTTTTGAC
CGCAAAGCAC AGACCTTTCA AAGTTGGCCC ATTCCCACTG GAGAGGGAGA CGCGCACATC
TACGCCGGTA TCGTGCGCCA CATGCGCCCA ACCCGTGACG GTAATCTGCT CATCCACCAA
AGCGCGACTA ATCGAATTAT TCTGGTGAAG GCTGAGACCA AAAAGGACTA A
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| Protein sequence | MKHLAKAIFT LGLTPVLSPG SLFAQSLPDT SGKDLVEAHC NACHTSERIV SSAGYNQTGW
QHLIATMVNL DGNPKREKIT AYLAEHFPPT SHRNPQLVEG DTSVTFEEWV VPTLGQRSRD
PIEAPDGSIW WAGQWGNLIG SINPQTGEMR EYPLPANAMP HTVTHDRRGN IWYTGNKNGT
LGMLNPQTGE ITEYKMPDSH AKDPHSAIFD DNGTLWFTLQ HSNMIGRLIP STGEIKLVTM
PTQDARPYGI KIDSKGTPWV ACNGSNCLVK VDPSTMAISE YPLPNENTTV RRLDIADDGM
IWYVNSRRGR LGRLNPNNGE VKEWPSPSGP NSHPYAIAVI GDAIWYNESG KRPDALVRFD
RKAQTFQSWP IPTGEGDAHI YAGIVRHMRP TRDGNLLIHQ SATNRIILVK AETKKD
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