| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1400 |
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| Symbol | |
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| ID | 4173540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1683561 |
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| End bp | 1684424 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054412 |
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| Product | OmpA/MotB |
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| Protein accession | YP_660979 |
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| Protein GI | 109897724 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000117865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCTA TCTTATTTAT AGTGTCCCTG ACGTTAAGCG GTTCTCTATC AGCTGGGCTA
CGGCAATACG CGGCAAAAAT TGAGACATCT GACTGGCAGT TAAGCCAGCA AAGTCGTTTG
CAGTGTACCT TGGCACATAA AATACCAGGC TATGGTGAGG CAATGTTTAC TAGCATGGCG
TCTAAGCAAC TGAATATGGA GTTTGAGCTT GATATGCTGC GTTTGCCTAA AACGTTTGGT
ATGGCGTCTG TCTATTCTGT TCCTCCTCGG TGGATGCCGG GGCAAATGCA CCACGCCATT
GCAGATATGA CCATACGTAA GCAATACAAT GGCGATCTGC CAGAGCAAGT TGCGTGGACT
ATGCTCTCGG AACTAGAAAA GGGTTTCTGG CCGACCATAT ATTATCAAGA CTGGTACAAT
CAAAATGACA GGATTTCAGT TGGCTTAAAT GCCAGCAATT TTGCTGCCCC TTATGAAAAT
TTCGCACAAT GTGTATCGAA CCTACTGCCC TATAGTTTTG ATGATATTGC CTACACCATT
CTCGCCTACC AGAAAAACAG CACCGAATTG ACCAAGTACT CCCAGCGCCG TTTGAATATG
ATTGGTCAAT ACCTCAAAGA AGATAGCGAT ATGGAATTAG TTTTGCTCGA CGGTTACAGC
GATAGCTACG GCGGTCGAGA CATGAACAAA ACCTTGTCGG TGAGTCGTGC GGTAGAGATA
AAAAATTACT TTAGCGACAT GGGCGTAGCA CCTCAGCGAA TCGAAGTGAC AGGCCATGGC
GAACGACGAC ACATTGCCCC GAATACCAAT GAAATGTCCC GTGCAAAAAA CCGACGTGTG
GTGATCCGCA TGGCGAAACC TTAG
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| Protein sequence | MKSILFIVSL TLSGSLSAGL RQYAAKIETS DWQLSQQSRL QCTLAHKIPG YGEAMFTSMA
SKQLNMEFEL DMLRLPKTFG MASVYSVPPR WMPGQMHHAI ADMTIRKQYN GDLPEQVAWT
MLSELEKGFW PTIYYQDWYN QNDRISVGLN ASNFAAPYEN FAQCVSNLLP YSFDDIAYTI
LAYQKNSTEL TKYSQRRLNM IGQYLKEDSD MELVLLDGYS DSYGGRDMNK TLSVSRAVEI
KNYFSDMGVA PQRIEVTGHG ERRHIAPNTN EMSRAKNRRV VIRMAKP
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