Gene Patl_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1395 
Symbol 
ID4173535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp1680172 
End bp1680753 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content45% 
IMG OID638054407 
Productsuperoxide dismutase 
Protein accessionYP_660974 
Protein GI109897719 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTCG AACTACCAGC TCTTCCGTAT GAAAAAAATG CTTTAGAACC ACATATCTCA 
GCTGAAACGT TGGAATATCA CTACGGCAAG CATCACGCGA CTTATGTTAC TAAGCTAAAC 
GGCTTGGTTG AAGGTACTGA TATGGCGAAT AAAGATCTTG AAGAGATCGT TAAATCGTCA 
GAAGGCGGAG TTTTCAATAA CGCTGCTCAA ATCTGGAACC ACACGTTCTA CTGGAACAGC 
CTAAGCCCTA ATGGCGGCGG CGAGCCAACT GGCGCTCTTG CTGATGCAAT CAATGCTAAA 
TGGGGTTCTT TCGCAGACTT CAAAGCCGCA TTAAACGACA AAGCAGTTAA CAACTTTGGT 
TCAAGCTGGA CTTGGCTTGT AAAAACTGCT GATGGCAGCC TAGACATCGT TAACACTAGC 
AACGCAGGTA CCCCGTTAAC GGATGCAAGT GTTACCCCTC TACTAACAGT AGATTTGTGG 
GAACATGCTT ACTACATCGA TTATCGTAAT GCTCGTCCTA AGTACCTTGA AGGTTTTTGG 
GCACTAGCAA ACTGGGATTT CGCAGCGAGC AACTTCGCTT AA
 
Protein sequence
MAFELPALPY EKNALEPHIS AETLEYHYGK HHATYVTKLN GLVEGTDMAN KDLEEIVKSS 
EGGVFNNAAQ IWNHTFYWNS LSPNGGGEPT GALADAINAK WGSFADFKAA LNDKAVNNFG 
SSWTWLVKTA DGSLDIVNTS NAGTPLTDAS VTPLLTVDLW EHAYYIDYRN ARPKYLEGFW 
ALANWDFAAS NFA