| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1392 |
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| Symbol | |
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| ID | 4173532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1675056 |
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| End bp | 1676621 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054404 |
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| Product | SpoVR family protein |
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| Protein accession | YP_660971 |
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| Protein GI | 109897716 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2719] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA CTCAAGCAGA TGTGCAGCAC AAGCAAACTT CAGATGTGCT AAGCGATGGC
CCCGACTGGA CTTTCGAGCT TTTGACCGAA TACGAACAAG AGATTGATCG CGTAGCGAAA
CATTATGGCT TAGACATTTA TCCCAACCAG ATAGAAATTA TTACCGCTGA ACACATGATG
GATGCCTACG CGAGTATCGG TATGCCGGTT AATTACGCCC ATTGGTCTTA TGGCAAGAAA
TTTATTCAAT CAGAGCAAAA TTATCGCCGC GGCCAAATGG GATTGGCCTA CGAAATCGTT
ATTAATTCAG ACCCTTGCAT CGCCTATCTA ATGGAAGAGA ACACCATGCC TATGCAAGCA
CTGGTAATAG CCCATGCTTG TTACGGCCAT AACTCGTTTT TCAAAAACAA CTATCTTTTC
AAAGCATGGA CAGACGCTAG CTCTATCATA AACTACTTAT TATTTGCCAA AAATTATGTG
GCTAAGTGCG AACAAAAATA TGGTGTGAGT GAAGTCGAGA ATGTGCTCGA CTCTTGTCAT
GCGTTGATGA ATTTCGGCGT TGACCGCTAC AAACGGCCGC AGAAAATATC CATGCAGATC
GAGCGGGAGC GCCAGCAAAA TCGTGAGCAA CATATCCAAT CTCAAGTGAA TGAATTATGG
CGTACCTTGC CCAAGTCTGA AGCTAAAAGC AGTGAACCTA ATCGAAGGTT CCCTTCTGAG
CCACAAGAAA ATGTGCTCTA TTTTATCGAA AAGAACGCCC CCTTGTTGGA ACCTTGGCAA
CGAGAATTAG TACGTATCGT GCGTAAAGTA TCTCAGTATT TTTACCCACA AAAACAGACG
CAGGTTATGA ACGAGGGGTG GGCCTGCTTT TGGCATTACC ATATACTTAA CCATCTCTAC
GATGAGGGTA AACTCACAGA TAAGTTTATG CTCGAGTTTT TACACAGCCA TACCAATGTG
GTGGCACAAC CGGCATATAA TCAACCGAAT TATTCAGGCC TCAATCCATA TGCACTCGGC
TTCAATATGT TTATGGACAT AAAGCGCATT TGCCAATCAC CCACTGATGA AGACCGCCAA
TGGTTTCCTG AAATTGCAGG CAAAGATTGG TTGGAAACAG TCCACTTCGC TATGCAAAAC
TTTAAGGATG AAAGCTTTAT CAGTCAGTTT ATGTCACCAA AGCTAATGCG TGATTTTAAG
TTTTTCGCCA TTGAAGATGA TGAACAAAAC GCGTTTCTCG ATGTTTCCGC CATTCATGAC
GAAGCCGGTT ATCACGCCAT CAGAGAGAAG CTATCCGCGC AATATAACTT GAGTAATCTT
GAGCCAAATA TACAAGTGTA TGATGTAGAC TCCCGAGGCG ACCGCTCTTT AACCTTGTCA
TATTTACCAC AAAACGGTGT TCCACTGGCT GACAGCCAAC ATAAAGTGTT AAAGCATCTA
CATCATTTGT GGGGATTTTC TGTTAAATTA GAGCAAATAG ACGAACACGG TTCACGGCAA
ACACTTGCTA CCTACCCGGA TCAGCCGGTA GAGAATTCAC AACCCCTAAC AGGCATCATA
ATTTAG
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| Protein sequence | MKNTQADVQH KQTSDVLSDG PDWTFELLTE YEQEIDRVAK HYGLDIYPNQ IEIITAEHMM
DAYASIGMPV NYAHWSYGKK FIQSEQNYRR GQMGLAYEIV INSDPCIAYL MEENTMPMQA
LVIAHACYGH NSFFKNNYLF KAWTDASSII NYLLFAKNYV AKCEQKYGVS EVENVLDSCH
ALMNFGVDRY KRPQKISMQI ERERQQNREQ HIQSQVNELW RTLPKSEAKS SEPNRRFPSE
PQENVLYFIE KNAPLLEPWQ RELVRIVRKV SQYFYPQKQT QVMNEGWACF WHYHILNHLY
DEGKLTDKFM LEFLHSHTNV VAQPAYNQPN YSGLNPYALG FNMFMDIKRI CQSPTDEDRQ
WFPEIAGKDW LETVHFAMQN FKDESFISQF MSPKLMRDFK FFAIEDDEQN AFLDVSAIHD
EAGYHAIREK LSAQYNLSNL EPNIQVYDVD SRGDRSLTLS YLPQNGVPLA DSQHKVLKHL
HHLWGFSVKL EQIDEHGSRQ TLATYPDQPV ENSQPLTGII I
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