Gene Patl_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1389 
Symbol 
ID4173529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1673792 
End bp1674160 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content43% 
IMG OID638054401 
Producthypothetical protein 
Protein accessionYP_660968 
Protein GI109897713 
COG category[S] Function unknown 
COG ID[COG3112] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATC AATTTATTCG CAATGATCGC GCAGAGCCTG CCGCCATTTT TGAAATGGGA 
GCGGAAACGC TCGGCTTATG GTTCAGTGAA GAGCTCGGTC GAGATCGCCA GAAAATAAAG
CACTTGTTGG ATGTTATTCA GCAATTAGAA CACAAAGACA TTGAGCAATA TGCGTTGCAA
GGGCGTGAAT TCAATATGGA TTTAACGCGA GATGAGATAG AAGTTTACGC GGCCATAACC
CGAGATGAAG GCGAAATTGA TATTCCTGAA GACACCGAAT TATACGATCA GGAATCTATC
TGCGGTTGCG GCTTAGAAGA CTTCAAAGAA GTCCTGTTAT CATGGCAACA ATTTGTAGGC
AGAATGTAG
 
Protein sequence
MDYQFIRNDR AEPAAIFEMG AETLGLWFSE ELGRDRQKIK HLLDVIQQLE HKDIEQYALQ 
GREFNMDLTR DEIEVYAAIT RDEGEIDIPE DTELYDQESI CGCGLEDFKE VLLSWQQFVG
RM