| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1366 |
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| Symbol | |
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| ID | 4171863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1643567 |
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| End bp | 1645168 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054379 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_660946 |
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| Protein GI | 109897691 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTTA CTTTGCAAAC ATTAGATAAA GATTTTAGCG AGCGTTTAGC CATCCTAGCG
AAAGAAGACC TTGCTTCTAC ATTAGCGGGC ATAAGCCATG GAATAGAGCG TGAAGCGCTG
CGCATTCAAC CTAATGGTAA GTTAGCGCAA ACGCCCCACA ATGAAAAATT GGGGGCCGCT
TTAACCCACG ATTACATTAC GACTGATTTC TCTGAGTCCC TTTTGGAGTT TATTACACCA
CCTGAGCAAA ATGTTGATAA AACATTGGGC CAGCTTCGTG ACGTGCATAA ATTTGCACTC
GCCAATATTG GTGATGAATG TTTGTGGCCT ATGAGTATGC CTTGCTACAT AGATGATCAA
AATGAGATCC CCATTGCGCA GTTCGGCAAA TCTAATGTGG GTAAAATGAA AAGCCTTTAT
CGGGAAGGCC TAAAGAATCG ATATGGCAGT ATGATGCAAG CGATTGCGGG AGTGCATTTT
AATTTTTCAT TGCCAGACAG TTTTTGGGAT CTTTGGCTAG ATAAAGTCGA AAGTAGCGAA
AATAATAAAG AAACGAAGTC AGCAGCTTAT TTCGCGTTAA TCAGAAACTA TCGGCGTTTC
TGCTGGTTAA TTCCCTATTT ATATGGCGCG TCACCTGCAT TATGCAGTTC ATTTATCAAA
GGTAAAAACA CCACTTTACC TTTTAAAACC ATCGGTAAAG GGTCGCTCTA TCTACCTTAT
GCAACGTCAT TACGTATGAG TGATCTTGGC TACACTAACA GTGCTCAGTC GGGGTTGATG
ACATGTTACA ACCAAGTCGA CAGTTATATA GCCTCGTTAC GCAAAGCCAT TAGTACGCCC
TCAGAAATAT TCGAGAAATA CGCGGGCAAG AAAGACGGAC AATACCAGCA ACTTAACAGC
AACATGTTAC AGATAGAAAA TGAGCTGTAC TCACCCATCC GTCCGAAACA ACCCACAAAA
CCGTTAGAGA AGCCGACAGA CGCTTTGCAA GCTCGAGGGG TTGAGTACAT AGAAGTACGC
GCATTGGATG TGGATCCGTT TAGTGATATT GGCATCGAGC GTAATCAGTT TTTCTTCTTA
GATGTTTTTC TTGTGTATTG TGTGGTGATG CCGAGCCCGG ATATGACGCC AGACTCGTAC
CGTGAAACAG AAACTAACTT ACGTGCCGTG GTTGATCATG GTCGCGACCC TGAACTGATG
CTCTCGAAAG AGGGTAAATC TGTACCAATG ACCCAATGGG CCGCTGAATT GTTTGCAGGC
ATGAGAGAAG TGGCCAAAGT ACTGGACAGT AACCATGCCG TGGCAGAATA CAGTCAAGCG
GTAGAACAAG AGTGGCAAAA AATTGTTGAT CCAGCGTTAA CACCTTCTGC CAAGGTATTA
GCAATATTAC TAGGTAAGAA CAAAGATAAT GGCACGCTAG GGGTAGAATT GGCCTCAGCG
TACAAGCAGA GCCTAAATGA AGCTGAGTAT CACTTCTTCG ACGCAGAAAA GCTTAGTCAG
CATGCTGTGA GCTCGTTGGA TGCTCAGCAT CATATCGAGA AGTCTGACAC GGTGAGCTTT
GATCAATTCT TAAGTGACTA TTTTACCTAT CAGTTTAATT AG
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| Protein sequence | MEFTLQTLDK DFSERLAILA KEDLASTLAG ISHGIEREAL RIQPNGKLAQ TPHNEKLGAA
LTHDYITTDF SESLLEFITP PEQNVDKTLG QLRDVHKFAL ANIGDECLWP MSMPCYIDDQ
NEIPIAQFGK SNVGKMKSLY REGLKNRYGS MMQAIAGVHF NFSLPDSFWD LWLDKVESSE
NNKETKSAAY FALIRNYRRF CWLIPYLYGA SPALCSSFIK GKNTTLPFKT IGKGSLYLPY
ATSLRMSDLG YTNSAQSGLM TCYNQVDSYI ASLRKAISTP SEIFEKYAGK KDGQYQQLNS
NMLQIENELY SPIRPKQPTK PLEKPTDALQ ARGVEYIEVR ALDVDPFSDI GIERNQFFFL
DVFLVYCVVM PSPDMTPDSY RETETNLRAV VDHGRDPELM LSKEGKSVPM TQWAAELFAG
MREVAKVLDS NHAVAEYSQA VEQEWQKIVD PALTPSAKVL AILLGKNKDN GTLGVELASA
YKQSLNEAEY HFFDAEKLSQ HAVSSLDAQH HIEKSDTVSF DQFLSDYFTY QFN
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