| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1340 |
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| Symbol | |
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| ID | 4172804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1607753 |
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| End bp | 1608577 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054347 |
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| Product | CDP-diacylglycerol--serine O-phosphatidyltransferase |
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| Protein accession | YP_660920 |
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| Protein GI | 109897665 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1183] Phosphatidylserine synthase |
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| TIGRFAM ID | [TIGR00473] CDP-diacylglycerol--serine O-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00208453 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGAAT CTAAGCGTAA AGGTATTTAC CTTTTACCTA ATTTATTAAC CACTGCCGGT
TTATTTTCTG GCTTCTATGC TGTTGTTGCG TCAATGAATG GACACTTCGA AGCTGCGGCT
GTAGCGATAT TCATCGCAAT GATTTTTGAC GGCCTTGATG GCCGTGTTGC TCGTATGACC
AATACCCAAA GTGAATTTGG GGCCGAATAC GACTCTATGG CAGATATGGT GTCATTCGGT
ATGGCGCCAG CGCTGGTTGC CTACAACTGG GGATTAAGCG GTTTAGGTAA AATAGGTTGG
TTAGCTGCCT TTATATACGT AGCTGGAGCA GCTTTGCGTT TAGCGCGTTT TAATACTCAA
ATTGGTATTG CCGATAAACG CTATTTCCAA GGTTTAGCCA GCCCCGCGGC GGCTGCATTG
GTGGCAGGTC TCGTTTGGGT AGGCGGAGAG TATGACGTCA ATGGTGACGA CTACGGCGTT
CTAGTTGCCT TGGTCACTAG CTTGGCAGGC CTATTGATGG TGAGTAATTT TAAATACAAT
TCATTCAAAG AAGTAAACTG GCACGGTAAA GTGCCATTTG TTGCTTTACT TCTAGTGATG
CTGATTTTTG TAGTGGTAGC GACTGAGCCT GCTTTAGTTC TATTCGTGGT TTTTGCCTTA
TACGCACTCG CTGGGCCTAT CAACACCTTT AGGAGTGTAG ATAAGGTCAA GTTAGAACAT
GTAGTAGGGG ATGCAGATGA AAACGATGCC GATTTTACCC AAGGTGATGA GCAATCTGAG
AGCACCACAG ATGATGACGT TGAGGAACCA ACGAACAAGC AGTAG
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| Protein sequence | MPESKRKGIY LLPNLLTTAG LFSGFYAVVA SMNGHFEAAA VAIFIAMIFD GLDGRVARMT
NTQSEFGAEY DSMADMVSFG MAPALVAYNW GLSGLGKIGW LAAFIYVAGA ALRLARFNTQ
IGIADKRYFQ GLASPAAAAL VAGLVWVGGE YDVNGDDYGV LVALVTSLAG LLMVSNFKYN
SFKEVNWHGK VPFVALLLVM LIFVVVATEP ALVLFVVFAL YALAGPINTF RSVDKVKLEH
VVGDADENDA DFTQGDEQSE STTDDDVEEP TNKQ
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