| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1315 |
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| Symbol | nusB |
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| ID | 4173363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1582731 |
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| End bp | 1583153 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054322 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_660895 |
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| Protein GI | 109897640 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAACCAG CAGCCCGTCG TAAAGCTAGA GAATTAGCGG TTCAAGCCGT TTACTCTTGG
CAGATGTCAA AAAATCCACT TGACCAGATA GAACTGAGTA TCGTCACGAG CAATAACATG
CAAGATGTCG ACACCGAGTA CTTTCTAGAG TTGTTGCGCG CCGTTGTGCG CAGAACGGCC
GAGCTGGATG CGAAAATCAA ACCTTATTTG GGGCGTTTAC CGGAAGAGCT TGATCCTGTT
GAAAACGCTA TTTTACGACT GGCTACTTAC GAACTTGTTG AGCGTATTGA TGTCCCTTAT
AAAGTGGTCA TTAATGAGGC CATTGAGCTT GCTAAGTCGT TTGGTGCTGA AGAGAGCCAC
AAGTTTGTGA ATGGGGTGCT TGATAAAGCC ATAAAAACCC TTCGTAAACA CGAGTTGTCA
TAA
|
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| Protein sequence | MKPAARRKAR ELAVQAVYSW QMSKNPLDQI ELSIVTSNNM QDVDTEYFLE LLRAVVRRTA
ELDAKIKPYL GRLPEELDPV ENAILRLATY ELVERIDVPY KVVINEAIEL AKSFGAEESH
KFVNGVLDKA IKTLRKHELS
|
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