Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1263 |
Symbol | |
ID | 4173274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1512654 |
End bp | 1513247 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638054270 |
Product | ribonuclease H |
Protein accession | YP_660843 |
Protein GI | 109897588 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGT TAATTGCAGG TGTCGATGAA GTTGGCCGCG GGCCCTTGGT GGGCGATGTG GTAACCGCCG CTGTTATCCT TGACCCAGCC AAACCGATTG CCGGGTTAGC AGATTCAAAG AAAATATCAG AGAAAAAACG TCTCGCCCTG TTTGATATCA TCATGCAGAA CGCATTAGCG GTCTGTGTAG GCAGAGCGTC ACCGCAAGAG ATTGACGAGT TAAATATCCT GCATGCCACC ATGCTTGCTA TGAAGCGAGC AGTGCAAGGG CTAGCAACCC AGCCCACGTT TGTGCGCGTA GACGGTAATC GTTGTCCTAA TTGGGATTAT GCCAGTGAAG CGGTGGTAAA AGGTGATAGC CTATTTGCTG AAATTTCAGC GGCTTCAATT ATTGCGAAAG TGACCAGAGA TGCGGAAATG AGCGAGTTAC ACAATGCTCA CCCTGAATAC GGTTTCGCTC AGCACAAGGG ATACCCCACA AAAGCGCACC TAGAAAAACT GGCTGAACTT GGCCCTTTAT CTCAGTACCG AATGAGCTTC AAACCCGTGC AATTATCGTT AATGCAACGT GGCGGGCAGT TGGCAGGAAA CTAA
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Protein sequence | MTQLIAGVDE VGRGPLVGDV VTAAVILDPA KPIAGLADSK KISEKKRLAL FDIIMQNALA VCVGRASPQE IDELNILHAT MLAMKRAVQG LATQPTFVRV DGNRCPNWDY ASEAVVKGDS LFAEISAASI IAKVTRDAEM SELHNAHPEY GFAQHKGYPT KAHLEKLAEL GPLSQYRMSF KPVQLSLMQR GGQLAGN
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