| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1248 |
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| Symbol | |
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| ID | 4173259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1497404 |
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| End bp | 1498195 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054255 |
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| Product | methionine aminopeptidase, type I |
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| Protein accession | YP_660828 |
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| Protein GI | 109897573 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.931563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCAGCTA CTATCAAAAC CGCACAAGAA ATTGAAAAAA TGCGCGTTGC CGGGCGACTC
GCAGCAGATG TATTACAAAT GATTGGTCCT CACGTCAAAA AAGGCGTGAC CACAGAAGAA
CTGAACCAAA TTTGTCATGA TTACATCGTT AATGAACAGC AGGCTATCCC TGCCCCGTTG
AATTACGGTA ATCCGCCGTT TCCTAAGTCT ATCTGTACCT CTGTTAATCA TGTTATCTGC
CACGGTATTC CGGCCGACAA AAAATTAAAA GACGGCGACA GTGTAAATAT TGACGTCACC
GTTATAAAAG ACGGTTACCA CGGCGACACG TCAAAAATGT TTGTGGTTGG CAAACCAAGC
ATTATGACTG AACGCCTAAT CCGCGTCACC CAAGAAGCCC TTTATATCGG CATTAAGATG
GTAAAGCCGG GAGTGCGTTT AGGCGACATT GGGCACGCCA TACAGCAACA TGCTGAAGGC
CATAACTATT CAATTGTACG TGAATACTGT GGCCATGGTA TCGGCGCTAA CTTCCATGAA
GAGCCTCAGG TCGTTCACTA TGGTCGCCCA AACACAGGTG AGGTATTGGA GGCCGGCATG
TGTTTTACCA TCGAACCCAT GGTCAATGCA GGTAAACGTT ACTCTAAAGT GTTGCCTGAT
GACTGGACCG TCGTCACTAA AGATCGCAGC CTTAGCGCTC AATGGGAGCA CACCTTATTA
GTGACCGAAA CCGGGGTCGA AATTCTTACC CTGCGGGACG ATGAGGAAAT AGAGCGCGTC
ATTAATCATT AA
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| Protein sequence | MPATIKTAQE IEKMRVAGRL AADVLQMIGP HVKKGVTTEE LNQICHDYIV NEQQAIPAPL
NYGNPPFPKS ICTSVNHVIC HGIPADKKLK DGDSVNIDVT VIKDGYHGDT SKMFVVGKPS
IMTERLIRVT QEALYIGIKM VKPGVRLGDI GHAIQQHAEG HNYSIVREYC GHGIGANFHE
EPQVVHYGRP NTGEVLEAGM CFTIEPMVNA GKRYSKVLPD DWTVVTKDRS LSAQWEHTLL
VTETGVEILT LRDDEEIERV INH
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