Gene Patl_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1240 
Symbol 
ID4172706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1487957 
End bp1488280 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content44% 
IMG OID638054247 
Productiron-sulfur cluster assembly protein IscA 
Protein accessionYP_660820 
Protein GI109897565 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR02011] iron-sulfur cluster assembly protein IscA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGAATTA AAATTTCTGA GGCTGCGGCA CAACGAGCAT CTAGCTTTCT GCAAAACAGA 
GGCTCAGGGC TAGGCTTGCG CTTAGGAGTC AAAACCACGG GTTGTTCTGG TTTAGCGTAT
GTGTTGGAAT TTGTCGACGA GTTAAACGAA GATGACCATG TTTTTGAAGA TAATGGCGTT
AAAATCATTA TCGATGGTAA AAGCTTGGTG TACTTAGACG GTACCGAATT AGATTTTGCC
AAAGAAGGCC TGAACGAAGG GTTCCAGTTT AATAACCCTA ACGCAAACGG CGAATGTGGC
TGCGGCGAAA GTTTTAACGT ATAG
 
Protein sequence
MGIKISEAAA QRASSFLQNR GSGLGLRLGV KTTGCSGLAY VLEFVDELNE DDHVFEDNGV 
KIIIDGKSLV YLDGTELDFA KEGLNEGFQF NNPNANGECG CGESFNV