| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1238 |
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| Symbol | |
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| ID | 4172704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1486264 |
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| End bp | 1487487 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054245 |
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| Product | cysteine desulfurase IscS |
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| Protein accession | YP_660818 |
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| Protein GI | 109897563 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.01856 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA TTAAGTTACC AATTTATTTA GATTATTCAT CAACCACCCC GGTTGACCCT
CGTGTTGCTG CCAAAATGGC AGAGTGTTTA ACCAACGAAG GCAACTTTGG TAACCCTGCA
TCGCGTTCTC ACCGTTTCGG TTGGGTAGCA GAAGAAGCAG TCGACGTTGC TCGTAATCAA
ATTGCTGATT TGATCAATGC AGATCCTCGT GAAATTGTTT TCACCTCTGG CGCAACAGAA
TCAAATAACC TTGCAATTAA AGGCGCTGCA CATTTTTACG GCAAGAAAGG TAAGCACCTC
ATCACAGTGA AAACTGAGCA TAAAGCCGTA CTTGATACGT GCCGCCAGTT AGAGCGTGAA
GGGTTTGAAG TGACGTATTT AGATCCTGAG CCAAATGGTT TGGTTGATAT CGAAAAATTC
ACAGCAGCCA TCCGCCCAGA CACGATTCTT GCTAGTGTGA TGCACGTAAA CAACGAGATT
GGCGTGATCC AAGACATCGC TGCTATCGGA GAAGTGTGCC GCGAGCGTAA AGTGTTGTTC
CATGTTGACG CTGCGCAAAG CACAGGCAAA GTGGCAATCG ATTTACAAGC GCTGAAAGTA
GACATGATGT CCTTCTCAGC ACATAAATCT TACGGTCCCA AGGGGATTGG AGCACTTTAC
GTTAGTCGTA AGCCTCGCGT TCGTCTTGAA GCGCAAATGC ACGGTGGCGG CCATGAGCGT
GGTATGCGCT CTGGTACCAT GGCAACTCAT CAAATTGTAG GTATGGGTGA AGCATTCCGT
ATCGCACAGG AAGAAATGGC CACCGAGAAC GAACGTATTC TAATGCTACG TAATCGCTTA
TGGGATGGAA TCAAAGATAT TGAAGCGGTT TACATCAATG GTGACATTGA ACAACGCGTT
GCAGCGAACT TAAATGTGAG TTTTGCATTC GTTGAAGGTG AGTCTTTGAT CATGGCCCTT
AAAGATATGG CCGTATCATC TGGTTCAGCT TGTACATCAG CCAGCTTAGA GCCGTCTTAT
GTACTTCGCG CGCTTGGTTT GAATGATGAA TTGGCCCATA GCTCAATTCG TTTCACAATC
GGCCGTTTTA CCACCGAAGC TGAAATCGAC CATGTGATAA GCGTAGTACG TAACGCAATC
GACAAATTAC GTGATATGTC TCCTTTGTGG GATATGTACA AAGAAGGCAT TGATTTGAAT
ACCGTTGAGT GGGCACACCA CTAG
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| Protein sequence | MSDIKLPIYL DYSSTTPVDP RVAAKMAECL TNEGNFGNPA SRSHRFGWVA EEAVDVARNQ
IADLINADPR EIVFTSGATE SNNLAIKGAA HFYGKKGKHL ITVKTEHKAV LDTCRQLERE
GFEVTYLDPE PNGLVDIEKF TAAIRPDTIL ASVMHVNNEI GVIQDIAAIG EVCRERKVLF
HVDAAQSTGK VAIDLQALKV DMMSFSAHKS YGPKGIGALY VSRKPRVRLE AQMHGGGHER
GMRSGTMATH QIVGMGEAFR IAQEEMATEN ERILMLRNRL WDGIKDIEAV YINGDIEQRV
AANLNVSFAF VEGESLIMAL KDMAVSSGSA CTSASLEPSY VLRALGLNDE LAHSSIRFTI
GRFTTEAEID HVISVVRNAI DKLRDMSPLW DMYKEGIDLN TVEWAHH
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