Gene Patl_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1232 
Symbol 
ID4172698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1482323 
End bp1483102 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID638054239 
Productinositol-1(or 4)-monophosphatase 
Protein accessionYP_660812 
Protein GI109897557 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.223718 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCCTA TGCTGAATAT AGCAGTGCGC GCGGCGCGTT CTGCGGGCAA CGTCATTGCC 
CGTGGTTTTG AAAATCAATC TGAATTAATG ATTGAAGCCA AAGGCAGTAA CGACTTCGTT
ACTCGCGTCG ATAAAGAAGC CGAGCAAGCA ATTATTCGCA AAATTCAACA ATCTTACCCT
GACCATTGTT TCGTGGGTGA AGAAGGCGGC GTAGTAGAAG GTAGCAACAC TGATTACAAA
TGGATCATTG ACCCGCTAGA TGGCACCACT AATTTTATCA AGGGTATTCC CCACTTCGCA
GTATCCATCG CTTTAATGCA TAAAGGTCGT TTAGACCAGG CGGTTGTGTT CGATCCTATT
CGTGGCGAAC TATTTACCGC AAGCAAAGGC GCTGGCGCTC AACTTAACGG TTTCCGTATT
CGTGCTAGTA AAGCAAAAGA GTTGAACCAA ACGATCCTTG CCACCGCACT TCCATACAAA
AACAAAGATG CATTACCGAC ATATCTTGAA AGCTTCCGTA ACATCTTTTT CCAAGCGGGT
GATGTGCGCC GTAGTGGTTC AGCTGCTCTG GATTTAGCCT ACGTTGCCGC TGGTCGTTAC
GACGGTTACT GGGAAAGTGG CTTGAAGCCA TGGGATATTG CAGCGGGTGA ACTTCTCGTT
CGTGAAGCTG GCGGCCTGGT AACAGATTTC AAAGGTAATA ACGACCCTAT GCATAACGGT
GACATCGTTG CTGGAAGCGC TAAAGTCGTG CAAACCTTAG TCAAGAATTT GAAAGCTTAA
 
Protein sequence
MHPMLNIAVR AARSAGNVIA RGFENQSELM IEAKGSNDFV TRVDKEAEQA IIRKIQQSYP 
DHCFVGEEGG VVEGSNTDYK WIIDPLDGTT NFIKGIPHFA VSIALMHKGR LDQAVVFDPI
RGELFTASKG AGAQLNGFRI RASKAKELNQ TILATALPYK NKDALPTYLE SFRNIFFQAG
DVRRSGSAAL DLAYVAAGRY DGYWESGLKP WDIAAGELLV REAGGLVTDF KGNNDPMHNG
DIVAGSAKVV QTLVKNLKA