| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1228 |
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| Symbol | tgt |
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| ID | 4172694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1477703 |
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| End bp | 1478815 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054235 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_660808 |
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| Protein GI | 109897553 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTTG AATTAGATAA CACAGACGGA AAGGCGCGCC GCGGCCGTCT TAAATTTGAC
CGAGGCATAG TTGAAACGCC TGCGTTTATG CCAGTTGGCA CATACGGCAC GGTTAAAGGC
ATGACGCCTG AAGAGCTTGA TGAAACGGGC GCGCATATAT GCTTAGGGAA TACCTTTCAT
TTAATGCTAC GCCCTGGCAC TGAAATCATT AAACAGCACG GCGATTTACA TGATTTTATG
CATTGGCAAA AACCTATCCT CACGGATTCA GGTGGTTTTC AGGTATTTAG CCTAGGGGAT
TTGCGTAAAA TCACCGAAGA AGGGGTAACT TTCCGCTCGC CAATCAACGG TGAAAAAATC
TTACTGACCC CTGAAAAATC GATGCAAGTG CAACGTGATT TGGGCTCTGA CATCGTGATG
ATTTTCGACG AATGTACGCC GCACCCGGCT ACCGAGAGCG AAGCACGCCA GTCGATGGAA
TTGTCATTGC GCTGGGCCAA GCGCAGTAAA GCGGAACATG GCGACAACCC ATCAGCGCTA
TTCGGTATCA TACAAGGTGG TATGTACGAA GGATTACGTG ACGTATCCCT TAAAGGTTTA
GAAGACATTG GCTTTGATGG CTATGCCATT GGTGGCTTGT CAGTAGGCGA GCCAAAAGAA
GACATGATCC GCATTTTGGA TCACACCACA GACAAAATCC CAGCGCACAA ACCGCGTTAT
TTGATGGGCG TGGGTAAACC GGAAGATCTG GTAGAAGGTG TGCGCCGCGG AGTCGACATG
TTTGATTGCG TTATGCCTAC TCGTAATGCT CGAAATGGTC ATCTTTTTGT TACCAGTGGC
ATTGTCAAAA TTCGCAACGC AGCCCATAAA ACCGACACGA GTCCACTAGA CGATAAATGT
GACTGTTACA CTTGTAAAAA TTATTCTCGG TCATATCTAC ATCACTTGGA CAAATGTAAC
GAAATATTAG GCGCGCGTTT AAATACTATT CATAACTTGC GATATTATCA GCGTGTTATG
CAAGGGTTGC GTGATGCGAT TGCCGAACAG AAGTTAGATG AATTCGTTGC GGATTTCTAC
GCACAAAAAG ATATGCCGGT ACCGGCGCTA TAA
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| Protein sequence | MQFELDNTDG KARRGRLKFD RGIVETPAFM PVGTYGTVKG MTPEELDETG AHICLGNTFH
LMLRPGTEII KQHGDLHDFM HWQKPILTDS GGFQVFSLGD LRKITEEGVT FRSPINGEKI
LLTPEKSMQV QRDLGSDIVM IFDECTPHPA TESEARQSME LSLRWAKRSK AEHGDNPSAL
FGIIQGGMYE GLRDVSLKGL EDIGFDGYAI GGLSVGEPKE DMIRILDHTT DKIPAHKPRY
LMGVGKPEDL VEGVRRGVDM FDCVMPTRNA RNGHLFVTSG IVKIRNAAHK TDTSPLDDKC
DCYTCKNYSR SYLHHLDKCN EILGARLNTI HNLRYYQRVM QGLRDAIAEQ KLDEFVADFY
AQKDMPVPAL
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