| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1214 |
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| Symbol | |
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| ID | 4172680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1464389 |
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| End bp | 1465333 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054221 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_660794 |
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| Protein GI | 109897539 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.134847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTT CAAAAGTAGA CCTCAATTTA TTGGTGTATC TGGACGTCCT TCTACGAGAA
GGCAGTGTTA CCCGCGCAGC AAATCAACTC AGTATTACCC AACCCGCCAT GAGTAACGGT
TTAAAGCGCC TTCGAGATCT TTTTAAAGAT CCCTTACTAG TGCGCACCAG TGACGGGATG
ACGCCGACTA AGCGTGCCCT GGAGCTGCAA CCCGTTATAC GCGATGTGTT ATCAAAACTT
GAGGCCTCGA TTCAACCAGA GACAGACTTT GTACCTGAAA CCAGTAAGCG TACATTTAGG
ATCATGGCCA GCGATTACGC TGAATCCACG TTGCTTCTTG AGGTCATACG CCAGTTGGCC
AAAGTCGCAC CAAACATAAC GCTAGATATG ATTACCCCTA GCGACGTGAC CTTTCATGAT
GTTGAGCAAG GTAAAGTGGA TATGGCCATT AACCGCTTTG AAGAGTTACC GTTATCGTTT
CATCAAAAAG TCGTTTGGTA CGATCGCTTT GCCTGTGTCG TTAGCAGTAA CAATCCCATA
GTAGATAACT TTACATTGCA AAATTACATC GACAGTAAGC ATATTTGGGT AAGTAAAACC
GGCTTTGGTG TCGGAGTCGG AATAGATCCG AATGAAGTGC AAAAATTAGG TTGGGTAGAT
GCCGAGTTGA CTAAAATTGG CCAAAAGCGC GATATAAGAG TGTTTACTCG CCATTATCAC
GTCGCTTTGC AACTCGCCAA GGTGCAGAAC TTAGTGGCAA CACTGCCTAG TAAAGCAGCC
GCGCTATATG AAAACGACCC AAATATTGTG ATCCTAGATC CACCGTTTGA TATACCACCG
ATTGGCCTAA AAATGGCTTG GAGCGCTTTG TTGCACCACG ATGCTGGACA TATTTGGTTA
CGTCGCCTAA TAACAGATGT CGGTGAAACC TTGTCTGCCC AATAG
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| Protein sequence | MNISKVDLNL LVYLDVLLRE GSVTRAANQL SITQPAMSNG LKRLRDLFKD PLLVRTSDGM
TPTKRALELQ PVIRDVLSKL EASIQPETDF VPETSKRTFR IMASDYAEST LLLEVIRQLA
KVAPNITLDM ITPSDVTFHD VEQGKVDMAI NRFEELPLSF HQKVVWYDRF ACVVSSNNPI
VDNFTLQNYI DSKHIWVSKT GFGVGVGIDP NEVQKLGWVD AELTKIGQKR DIRVFTRHYH
VALQLAKVQN LVATLPSKAA ALYENDPNIV ILDPPFDIPP IGLKMAWSAL LHHDAGHIWL
RRLITDVGET LSAQ
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