Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1194 |
Symbol | |
ID | 4172600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1439491 |
End bp | 1441395 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054201 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_660774 |
Protein GI | 109897519 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGTA TTGCAGGGTT TACACAATTT AGCGGGAACA TGGGTAACCA GCAAACCCTT AAAAAAATGG GTGACAGTAT TTATCATCGT GGTCCAGACG CTGGTCGCGA ATATATCGAT GAATACGTAG GTCTAGCCCA TCGTCGGTTG GCCATTATCG ACTTGTCAGA AGCCGGCACA CAGCCTATGT ACTCACATGA CGAAAGATAC ATCATTGCCT TTAACGGTGA GATATATAAC TTTCAGGCAC TTCGTGATGA CCTTGTCAGC GAAGGCTATC CATTTAAAAC CCACACGGAC ACAGAAGTGA TCCTTGCGCT CTATGCAGCG CACGGTGAAA AGATGCTTAG CATGTTAAAT GGCATGTTCG CATTCGCCCT TTGGGACACT ACCAGCAAGC GTTTACTCAT TGCTCGAGAT CGCGTAGGCA AAAAGCCCCT TTATTACCTT AAAACTGACA CTCAGTTTGC GTTTGCCTCT GAAATTAAAG CATTACTTAC ACTCCCCAAT GTGTCGCGGG AGGTCAGGCT AGACGCAGTA CATGACTTCT TTGCTTATCA ATATGTACCA GACCCAAAAA CTATTTTCAC CGATATTCAC AAACTGCCTC CGGCACACTT TATGTGGGTC TCGCAAGATG GGATACAGAT AGAACAATAC TGGGATGTTT CCTTTAAGCA AACCAGCAAT CAATCTCAGA CCGAACTGAC CAAAGCACTT TACGATTTAG CCACAGAAAA AACCTGTTCT CGTATGGTCA GTGACGTGCC CTTAGGCGCA TTTTTGAGTG GTGGAATAGA CTCCAGTGGT GTGGTCGCTA TGATGGCGCT GAATAGCGAT AAGCCAGTCA AAACCTGCTC AATAGGATTC GATGAAAAGC GTTTTAACGA AACCGAATTT GCCCAAATTG TCGCTGATCA ATATAAAACC GAGCACCACG AATTTACCGT TCACCAAAAT GTAAAAGACA ACTTAGAAGA GATAGTCGGT TATTTTGACG AGCCTTTTGC CGACCCATCT TTAGTACCAA CGTATTTTGT TTCTCAGTTG GCACGCTCTC AGGTAACGGT AGCGATTGCC GGTGATGGCG GCGATGAAGT ATTTGCAGGC TATGAAAAAT ACACCACAGA TGCACTGGAA AACAAACTAC GTGAACGCTT TCCCGAAGCG CTGCGCAAGA AGGTATTCCC TAAACTCGCC AACGTATTCG CTAAAAGTGA GCATCCACTA TTTAGAAAGG CTAAATCTCT GTTAACAAGT TTGAGTTTAG ACCCCGCCAT GGGGTTTTAT GTGACTAACT CGATGATAGA TGATCGCCTT TGGGAACGTT TAGCCTCATC AGATACCAAG GCTAAGTTAG GCGCTTACCA TCCAAGTGAA GTAACACTCG AAAACTACCA CAAGGCCGAT GGGAAAGACC ACTTGTCGAA GATTTTGTAT ACCGACATGA AGACCTACTT GCCCGGCGGC ATTTTAGTAA AAGTCGATCG TATGAGTATG GCGCACTCCT TAGAAGTGCG TGCGCCCCTA CTAGATAAAG ACGTCATTGA ATTCTCTGCT ACCCTGCCAT CGGATTTAAA ATATCGTGAC GGCGAGAAAA AATTCATCCT CAAAGAAGCC TTTAAACCAG TTTTGCCTGA TGATATTTTA TATCGCAAAA AAATGGGCTT CTCGGTGCCC TTAGCGACAT GGTTACGATG TGAAATTAAA GAACTAACCG AAGATTACTT GTTTAATAAA GCTCAGGGCA TCCAACAATA TTTTGATATG AATGTGGTCA AGCAGCTTTG GCAGCAACAT CAAGCAGAAA AAGCCGATCA CAGCACGGTG TTATGGAGCA TGTTGATGTT TCAAATGTGG TGGTTTCGTT ATATTCAATC GACTGAAATG ACAAAATCGC AATGA
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Protein sequence | MCGIAGFTQF SGNMGNQQTL KKMGDSIYHR GPDAGREYID EYVGLAHRRL AIIDLSEAGT QPMYSHDERY IIAFNGEIYN FQALRDDLVS EGYPFKTHTD TEVILALYAA HGEKMLSMLN GMFAFALWDT TSKRLLIARD RVGKKPLYYL KTDTQFAFAS EIKALLTLPN VSREVRLDAV HDFFAYQYVP DPKTIFTDIH KLPPAHFMWV SQDGIQIEQY WDVSFKQTSN QSQTELTKAL YDLATEKTCS RMVSDVPLGA FLSGGIDSSG VVAMMALNSD KPVKTCSIGF DEKRFNETEF AQIVADQYKT EHHEFTVHQN VKDNLEEIVG YFDEPFADPS LVPTYFVSQL ARSQVTVAIA GDGGDEVFAG YEKYTTDALE NKLRERFPEA LRKKVFPKLA NVFAKSEHPL FRKAKSLLTS LSLDPAMGFY VTNSMIDDRL WERLASSDTK AKLGAYHPSE VTLENYHKAD GKDHLSKILY TDMKTYLPGG ILVKVDRMSM AHSLEVRAPL LDKDVIEFSA TLPSDLKYRD GEKKFILKEA FKPVLPDDIL YRKKMGFSVP LATWLRCEIK ELTEDYLFNK AQGIQQYFDM NVVKQLWQQH QAEKADHSTV LWSMLMFQMW WFRYIQSTEM TKSQ
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