Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1143 |
Symbol | |
ID | 4173193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1382922 |
End bp | 1384055 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638054149 |
Product | PepSY-associated TM helix |
Protein accession | YP_660723 |
Protein GI | 109897468 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.193504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTGCT TCATTGTGTT GAGCGGCACG TTGGCTGTGC TCTCAAACGA AATGGACTGG CTAAGCAACC CCGCCATGCG AGTTACACCG TCAAGTGTTG AGGGTATGAA CTGGCAAGCG GTGTACGCCC GTGCTCAGCA AGAAGTCCCC GCTAGCACAC TACGCTCAAT TCAAGCGCCT TTGCACCCTT GGTATAGCGC CGAAGTTATT TACCTTGATG GAGATGAACA GCGCCACCGC TTGTTTTTTC ATCCTACCAC GGGGGAATAC CTTGGAGATG GGCGCTGGCA AAACTGGCAG CGTTTCTTTC GCATGTTGCA TCGCCACTTG ATGTTGCCGC TCACGTTAGG CATCACGGTA GTGAGCCTAT TCGCAGTGGT GATGCTGGCG ATGTTAGTGT CGAGTTTGTA TATCTATAAA GGATGGTGGA AGCACTTTTT TCGTGCGCCG CGCTGGCAGC ACCGCCAAAC ACGCTGGGTA GATTTACACC GTTTAGTGGG TGTATGGAGC TTATGGTTTT TGCTGATCAT TAGTGTGACT GGCTGCTGGT ATTTAGCTGA ACGCTGGGGG GCAGGTGCCC CTAGCCCAGA GCGGTTAACC GCCAGCGGCG CAAAGTCTAT AGCAAATTCG CTCATGCCAG ACACTGAACA CCTAGCGTTA ATGTTAGCGC AAGCCCATGA AAAATTTCCA GCGCTGTCTA TTACCAGGAT TAACTTCCCG CAAAAATCAG CTGATGCTTT GGAAATACAA GGCCAAGCAG ATGCAATACT TGTTCGCCCA AGAGCGAACT TTGTCAGTTT TGAACCTGTA AACGGGCAAC TCATTCAACA ACATGACGGA GTTAGCTTAA CCTTGCACAA TCGTATTTCA GAAGCTGCTG ACCCACTGCA TTTTGGGCAA TGGGGCGGTA TGTTTAGCAA GTTTTTGTAT TTTATTTTCG GTATTTTTTT AACGGGCCTC ACCGTTACGG GTACCTATAT GTACGGTATG CGTGTGGCGC GTATTTCCCG GCATGAAACA AAACCAAGGC GACGTATTTG GCGCCGGGCA GGGAGTCAAA TGAAAGCGCT GGGCTGGGTG TCGGCGATAG GCGTAATGGC CAGTGTCGGT TACGGCGCTT TTACTTTTTT ATAA
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Protein sequence | MLCFIVLSGT LAVLSNEMDW LSNPAMRVTP SSVEGMNWQA VYARAQQEVP ASTLRSIQAP LHPWYSAEVI YLDGDEQRHR LFFHPTTGEY LGDGRWQNWQ RFFRMLHRHL MLPLTLGITV VSLFAVVMLA MLVSSLYIYK GWWKHFFRAP RWQHRQTRWV DLHRLVGVWS LWFLLIISVT GCWYLAERWG AGAPSPERLT ASGAKSIANS LMPDTEHLAL MLAQAHEKFP ALSITRINFP QKSADALEIQ GQADAILVRP RANFVSFEPV NGQLIQQHDG VSLTLHNRIS EAADPLHFGQ WGGMFSKFLY FIFGIFLTGL TVTGTYMYGM RVARISRHET KPRRRIWRRA GSQMKALGWV SAIGVMASVG YGAFTFL
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