Gene Patl_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1143 
Symbol 
ID4173193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1382922 
End bp1384055 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content50% 
IMG OID638054149 
ProductPepSY-associated TM helix 
Protein accessionYP_660723 
Protein GI109897468 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.193504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGTGCT TCATTGTGTT GAGCGGCACG TTGGCTGTGC TCTCAAACGA AATGGACTGG 
CTAAGCAACC CCGCCATGCG AGTTACACCG TCAAGTGTTG AGGGTATGAA CTGGCAAGCG
GTGTACGCCC GTGCTCAGCA AGAAGTCCCC GCTAGCACAC TACGCTCAAT TCAAGCGCCT
TTGCACCCTT GGTATAGCGC CGAAGTTATT TACCTTGATG GAGATGAACA GCGCCACCGC
TTGTTTTTTC ATCCTACCAC GGGGGAATAC CTTGGAGATG GGCGCTGGCA AAACTGGCAG
CGTTTCTTTC GCATGTTGCA TCGCCACTTG ATGTTGCCGC TCACGTTAGG CATCACGGTA
GTGAGCCTAT TCGCAGTGGT GATGCTGGCG ATGTTAGTGT CGAGTTTGTA TATCTATAAA
GGATGGTGGA AGCACTTTTT TCGTGCGCCG CGCTGGCAGC ACCGCCAAAC ACGCTGGGTA
GATTTACACC GTTTAGTGGG TGTATGGAGC TTATGGTTTT TGCTGATCAT TAGTGTGACT
GGCTGCTGGT ATTTAGCTGA ACGCTGGGGG GCAGGTGCCC CTAGCCCAGA GCGGTTAACC
GCCAGCGGCG CAAAGTCTAT AGCAAATTCG CTCATGCCAG ACACTGAACA CCTAGCGTTA
ATGTTAGCGC AAGCCCATGA AAAATTTCCA GCGCTGTCTA TTACCAGGAT TAACTTCCCG
CAAAAATCAG CTGATGCTTT GGAAATACAA GGCCAAGCAG ATGCAATACT TGTTCGCCCA
AGAGCGAACT TTGTCAGTTT TGAACCTGTA AACGGGCAAC TCATTCAACA ACATGACGGA
GTTAGCTTAA CCTTGCACAA TCGTATTTCA GAAGCTGCTG ACCCACTGCA TTTTGGGCAA
TGGGGCGGTA TGTTTAGCAA GTTTTTGTAT TTTATTTTCG GTATTTTTTT AACGGGCCTC
ACCGTTACGG GTACCTATAT GTACGGTATG CGTGTGGCGC GTATTTCCCG GCATGAAACA
AAACCAAGGC GACGTATTTG GCGCCGGGCA GGGAGTCAAA TGAAAGCGCT GGGCTGGGTG
TCGGCGATAG GCGTAATGGC CAGTGTCGGT TACGGCGCTT TTACTTTTTT ATAA
 
Protein sequence
MLCFIVLSGT LAVLSNEMDW LSNPAMRVTP SSVEGMNWQA VYARAQQEVP ASTLRSIQAP 
LHPWYSAEVI YLDGDEQRHR LFFHPTTGEY LGDGRWQNWQ RFFRMLHRHL MLPLTLGITV
VSLFAVVMLA MLVSSLYIYK GWWKHFFRAP RWQHRQTRWV DLHRLVGVWS LWFLLIISVT
GCWYLAERWG AGAPSPERLT ASGAKSIANS LMPDTEHLAL MLAQAHEKFP ALSITRINFP
QKSADALEIQ GQADAILVRP RANFVSFEPV NGQLIQQHDG VSLTLHNRIS EAADPLHFGQ
WGGMFSKFLY FIFGIFLTGL TVTGTYMYGM RVARISRHET KPRRRIWRRA GSQMKALGWV
SAIGVMASVG YGAFTFL