| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1106 |
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| Symbol | |
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| ID | 4173635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1332556 |
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| End bp | 1333830 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054112 |
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| Product | phosphodiesterase I |
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| Protein accession | YP_660686 |
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| Protein GI | 109897431 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCTTT CTCGCTGGTT AATCGCTCTG GTTTCACTGA CACTGAGTAG TTTTGTCCAT
GCTCAAGCAG CCAAGCCTTA TGTCATCATG GTGGGTGTTG ATGGTTTGCG CCCTGCTAGC
GTTACCCAAA AAAACATGCC GAACTTATAC GCCCTTGGGC AGCAAGGCGT CACTGCAAAA
AGCATGACGC CAGCGATGCC AACGAAGACC TTTGTCAATT TTTATTCTAT CGCCACCGGG
CTGCACCCAA AGCATCATGG GATAGTATCT AACTACCCGT TTGACAGGCC GCTCAATCGT
AAATTTTCGC GCAATACGGA TGCAACAGAC CCTTACTGGT GGGGAGGAGA GCCCATTTGG
ATCACCGCTG AAAAGCAGGG GATGAAGGCT GCCACGTATT TTTGGGTCGG TTCAGAAGTG
GATATTAATG AAATCAGCCC TTCTTATCGA AAGACCTACA ATCAAAACAA GGATTACGCT
GAGCGAGTTA CTGAAGTGTT GCAATGGTTG TCGCTTCCCG AAGCGCAACG ACCACATCTT
GTTACCTTGT ATTTTTCCGC AGTGGACAGC GCGGCTCACG ATTTCGGCGT CAATTCTACA
GAAGAAATAA GTGCACTTGC ACGCATTGAC CAACATATTG GAGAGTTGCT CGCTGGGCTG
CAGAAACTAA AGGGTTATCA AGACATAAAT GTGGTGGTGG TTTCCGATCA CGGCATGATT
GACTTGAGCT CTGAACGAGT CATCAACCTA GACACTTTGG TAAATTGGTC AGATTTTGTC
GTTTCAGACT GGCCTAAAGA CACTTCCTCC GTATTTTCCC CCTTTTTGAA CTTATATGGT
GAACGTTCGC ACGTAGACAG TGCATATCAA GCACTAACGA TGAACCACAT TGCGCATCTA
CGCGTGATAA AGCGCCCTGC ACTCGCACAA AAATATCAGT TCAATCATCC TCAACGCGGC
CCTGATCTGA TGCTGTTAGC AGACCCTGGC TGGAGTATTT ATGCCAGTCA AGATAAAAGC
CAACCGAATG CATCGACATT AACACACACC GCAACCCATG GTTATGATAA CCAAGCACCA
GAAATGGCAG CGACCTTTAT TGCCAACGGC CCAGCTTTTG CTAAACAGAC GACTTCCAAT
CGTTTCGATA ACATCGAAGT GTATAACTTA ATTGCTTGTG CGCTGGGCAT AAAACCCGCC
CAAAACGACG GCAAGATGTC GAATGTTCGA CACATTTTAA GTGCCGAGAA ACAATCATGC
TTGGCAGAAC GCTGA
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| Protein sequence | MPLSRWLIAL VSLTLSSFVH AQAAKPYVIM VGVDGLRPAS VTQKNMPNLY ALGQQGVTAK
SMTPAMPTKT FVNFYSIATG LHPKHHGIVS NYPFDRPLNR KFSRNTDATD PYWWGGEPIW
ITAEKQGMKA ATYFWVGSEV DINEISPSYR KTYNQNKDYA ERVTEVLQWL SLPEAQRPHL
VTLYFSAVDS AAHDFGVNST EEISALARID QHIGELLAGL QKLKGYQDIN VVVVSDHGMI
DLSSERVINL DTLVNWSDFV VSDWPKDTSS VFSPFLNLYG ERSHVDSAYQ ALTMNHIAHL
RVIKRPALAQ KYQFNHPQRG PDLMLLADPG WSIYASQDKS QPNASTLTHT ATHGYDNQAP
EMAATFIANG PAFAKQTTSN RFDNIEVYNL IACALGIKPA QNDGKMSNVR HILSAEKQSC
LAER
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