Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1104 |
Symbol | |
ID | 4173633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1329512 |
End bp | 1330879 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054110 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_660684 |
Protein GI | 109897429 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCCAT CTGTTACGTT AGATCCCGCT TTACTTGAAA AATATCCACT TCGTGGACCG CGATATACGT CTTATCCGAC AGCGCCAAAC TTCACCCCCT TATTCAAGCA AGCCGATTTC TTAAACGCTG CAGAGCAAAG TGATAACAAA AACCTCTCTT TATATGTACA CATCCCGTTT TGCCATTATC TTTGCTACTA CTGTGGCTGC AATAAAATTG TGACCCAGTT ACAGACCAAA GCAAATGTGT ACCTTAAGCA TCTAATTGAA GAAATAAAGC AGCAAGCCAA GCACTTTGGG GCGAAAGCGG TTACTCACTT ACACTTCGGC GGCGGAACAC CCAATTTTCT AACTGACGAT CAGTTACTGC AACTGATGAA CGAGCTCAAA ACGCATTTTT ATTTCACCAC TGACGCACAA ATAAGTATCG AGATAGACCC AAGAGATATG ACCGTTGGGC GTATTGATGC CATGGCAGAC ATGGGATTCA ACCGTTTGAG TATCGGTTTA CAAGATACAG ATCCTAAAGT ACAAAAAGCG ATCAATAGGG TGCAGTCGAC GGAACTCATA GCGTCTTTGG TGGCTCGTGC CAAAGAGCGT CACTTTCGTT CAGTCAACTT AGATCTTATT TACGGCCTGC CTTTTCAAAC CCCTGAAAGT TTTGCCAATA CATTAGAGGC CGTACATGCG ATGCAAGTGG AGCGTGTGTC ACTGTTTAGC TATGCCCACT TACCAGAGCG TTTTGCTGCA CAGCGAAAAT TGTCAGTAGA CGCCCTACCG GACACAGAGC AAAAGCTCGC GTTAATGCAT CTAGCTGTGG ATAAACTTAC CCAATTTGGA TATCAATTCA TCGGCATAGA TCACTTTGCG TTACCGAATG ATGAATTAGC GCTAGCCCAA CAAAACAACA GCTTAATGCG TAACTTCCAA GGCTATACCA CGGGGCAAAA TACCGACCTG CTAGGGTTAG GAGTATCTGC AATTAGCGCC GTGGGCGAGA GCTACAGCCA GAACCAAAAA GGACTTGCTG ATTACTACTA CGCCATCGAA CACCAGAAAT CCGCCCTTGA GAAAGGATTG AAACTCAGCA AGGACGACCG TATTCGACGC CGAGTGATTA GCGACATTAT GTGTAATTCC ATGGTTGATA AAACCGCTAT CTCTGTGTGC TTTGATATAG ATTTTGATGA GTACTTTGCT AGCGAATTGC GTGGATTAAC TATGTTTATT CAAGATGGTT TGATGCTAAA TTTACCCCAC GCACTTTACG TTCAGCCCAA AGCCCAACTC TTGTTACGCA GCATTTGCAT GGCATTTGAT GCCTATCTGG GGCTCGATAC ACAGCAGAAG TTTTCAGCGA CGATATAG
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Protein sequence | MHPSVTLDPA LLEKYPLRGP RYTSYPTAPN FTPLFKQADF LNAAEQSDNK NLSLYVHIPF CHYLCYYCGC NKIVTQLQTK ANVYLKHLIE EIKQQAKHFG AKAVTHLHFG GGTPNFLTDD QLLQLMNELK THFYFTTDAQ ISIEIDPRDM TVGRIDAMAD MGFNRLSIGL QDTDPKVQKA INRVQSTELI ASLVARAKER HFRSVNLDLI YGLPFQTPES FANTLEAVHA MQVERVSLFS YAHLPERFAA QRKLSVDALP DTEQKLALMH LAVDKLTQFG YQFIGIDHFA LPNDELALAQ QNNSLMRNFQ GYTTGQNTDL LGLGVSAISA VGESYSQNQK GLADYYYAIE HQKSALEKGL KLSKDDRIRR RVISDIMCNS MVDKTAISVC FDIDFDEYFA SELRGLTMFI QDGLMLNLPH ALYVQPKAQL LLRSICMAFD AYLGLDTQQK FSATI
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