| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1088 |
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| Symbol | |
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| ID | 4172627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1307943 |
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| End bp | 1308770 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054094 |
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| Product | WecB/TagA/CpsF family glycosyl transferase |
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| Protein accession | YP_660668 |
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| Protein GI | 109897413 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
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| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTCTCT CGTTATACAA AGCAGGGAAT CGTATTGAAA TAGTTAAACG AGATGAATCA
ATGAAATTAG AAGAAGTAGT AAAAACAAAT GTCGGCGGAT TAATTACCGC ATGTGTTGAC
CGCAAACAGT TAGTTGATTT GATGGTGTGT CGCGTTTTGG ATACACGGGC GGGTGATATC
AAATCGCCTC TCGTTATTTT TTCATCAAAT GGCCACAGTA TCTCTATTGC CAATAGTGAT
CCTGAAATGG GCCGTATGCT TAATGAAGCC GATATACTGC ATGCCGATGG GCAAAGTGTG
GTGAGCTTTT CACGTTGGTT TAGTGAAAAG GAGATACCGG AACGCAGCGC TACCACAGAT
ACCATTCATG ACGTCCCTAT GATGTCACCA GAAACCGTTA AACATTTTCT TCTTGGGGCG
AACCAAGCAA CCATTGAAAA ATGCGGCAAT ATTATGTCAG AAAAATATAA TAACTTTGAC
GTTGTCGGCA CCCAACACGG GTATTTTAGC GAAGCAGACG AAGATGAGAT TGTCGCCAAA
ATTAATGCTT CAGGTTGCGA AGTGCTGTGG GTCGGGTTAG GAAAGCCCAA AGAGCAATTG
TTTATCTTGA GAAACAAAAG CAAGTTAACG GTTCCCGTCA TTATCTCGTG CGGCGGCTGC
TACAATTTTG TCACGGGCGA TTACAAACGT GCTCCCGCCA TCTTTCAAAA GCTAGGGTTA
GAATGGCTAC ACAGAGCCAT GACCGAACCT AAGAAGCTGT TATGGCGATA TATCACGACC
AACCCCCATG CCATATATTG TGTCATTAAA CATCGCTACT TTGTTTAG
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| Protein sequence | MALSLYKAGN RIEIVKRDES MKLEEVVKTN VGGLITACVD RKQLVDLMVC RVLDTRAGDI
KSPLVIFSSN GHSISIANSD PEMGRMLNEA DILHADGQSV VSFSRWFSEK EIPERSATTD
TIHDVPMMSP ETVKHFLLGA NQATIEKCGN IMSEKYNNFD VVGTQHGYFS EADEDEIVAK
INASGCEVLW VGLGKPKEQL FILRNKSKLT VPVIISCGGC YNFVTGDYKR APAIFQKLGL
EWLHRAMTEP KKLLWRYITT NPHAIYCVIK HRYFV
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