Gene Patl_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1084 
Symbol 
ID4172623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1301914 
End bp1303821 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content42% 
IMG OID638054090 
Productacyltransferase 3 
Protein accessionYP_660664 
Protein GI109897409 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.87667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATC GTCAAGATAT TGATGGTTTG CGCGCGATAG CAGTTCTTGC TGTGGTACTT 
TTCCATTTTG GTGTAACGGG TATGTCGGGT GGTTATGCTG GCGTCGATAT ATTTTTTGTC
ATCTCTGGTT TTCTCATTAC CTCTATTCTA ATGAAAGATG CAGAAACTCA ATCTATTAGC
TTTCTAGGTT TTTATGAAAA ACGTATTAGA AGGCTATTTC CAGCCCTTTT TGCAACCGTA
CTGGCTTCTT TCATCGCTGC ATATTTTATC TTTATGCCCG ATGAATTTAG GGAGTTTGGC
AGAAGCGCCA TTGCCGCCAT CGTTTATCTA TCTAATGTAT TTTTTTGGCT CAGTAGTGAT
TATTTTCAGG GCTCTTCGGA ATTAAGCCCA TTATTGCATA CATGGTCGCT TGCGGTAGAA
GAGCAATTTT ATTTGATATT TCCCGTCATT GTGTGGGCAA GCTATAAATT GGGTAAACGG
GCTTTTTATT GGTCTGTAGC CTCTTTATTC ACATGCTCAT TCGTTGCTTC AATATGGTAT
ATAAGCATCT CTGCTAGTAC GGTGTTTTAT TTGTCTCCCT TTCGATTTTG GGAGTTACTA
GCGGGTTCCA TAGTTGCCAT TGCATTCAAA GAAAACCTTG TCCCCAACGC AAAGATAGCA
AGTTGGTTAG GAGTCTTAGG CCTGATTTTG CTTGTTGCGC CTATTTTTGT TCTCAATAAA
GAAAGCTTAT TCCCAGGCTG GGCGGCAGTA CCTTCTTGTT TAGGCACGGC TTTACTGATT
TGGGCGAATG ATCAGAATAA ATGGATAGGC AAGCTGCTCA AACTAAGATT TATGCAATTT
ACGGGAAAAA TTTCCTATTC AATGTACCTT TGGCACTGGC CCATCGTAGT GTTTTACGGT
TACTGGATTA TTAGGGATCT TGTTTGGTGG GATACGCTTT TATTGGTAAT CGTGACCTAC
GCCATCAGTC ATTTATCCTG CAAGTACCTA GAAGCACCGT TCAGGCTCCA TCGGGGTGAC
ATTTTGCGCC CGCTAAAAGT CTACTCAACG TCCATTGCAT TTAGCTTCGT TATATTTGTT
CTTGGTGTAT TGGTTTGGAA AGCAGACGGT TATAAAGCCA GATTCCCTCA CTTTGTTGAA
CAACTCAACT TGAAGGACGC TCATAAAGAG AGCGGATTTG CAGGCTGCTT TATTAAAGAA
GATCAGTTTT ATAATGACAA TTGGAGCTAC GATTCGTGCG TTATGACAAT GCCCGGTGCA
ACAGAAACCA TTTTACTGTG GGGAGACTCA CATGCGTTTC ATCTCATCGG CGGACTCAAA
ACGATTCAGC AAGAGCTAAA TGTGAATATT GCGCTTTACG CCAGCGCCGG TTGCTCCCCA
TTGTTTGACA CCGATATTCC GCGCAACCCC CAATGCCGAG CGAACAATGA ATTTGTCAAA
GAGCTTATTG ATACCCATAA CATCAATGGT TTGGTTTTGG CTGGAAATTG GGCTTGGGCA
TTCAAAGTCG AAGACCCTGA TATCGATTTA TCGAGTGTGC GCTCAACATT TACTGCACTG
ACTGAAGCGG ATAAAAAAGT GTTTGTTGTT AATCAAGTCC CCATTTACCC CGTAAAGAAC
CCTGCGTTCT TAGGCATGCG CCTGTCCACT TCATCCAAAG CACCACAAGA TTATCTTTTG
GCCCCTGAGT ACGGTGTAAA GGCTTCCGAA CAAATAAAAT CGTTATTACC AGATGAAAAT
GTATTTAGCC CACAAGATTT ATTGTGTGAA AAGGGCAAGT GCCTTATATA TCGTAATAAA
GAAATAATGG TCAGGGATAG AGCACATCTT TCTAGTGCGG CCAGTATATA TATTGTGCAG
TCAATGGCAC CTAAATTAAA AAATGCGCTA GGCCTAGGTT TGAAATAA
 
Protein sequence
MKHRQDIDGL RAIAVLAVVL FHFGVTGMSG GYAGVDIFFV ISGFLITSIL MKDAETQSIS 
FLGFYEKRIR RLFPALFATV LASFIAAYFI FMPDEFREFG RSAIAAIVYL SNVFFWLSSD
YFQGSSELSP LLHTWSLAVE EQFYLIFPVI VWASYKLGKR AFYWSVASLF TCSFVASIWY
ISISASTVFY LSPFRFWELL AGSIVAIAFK ENLVPNAKIA SWLGVLGLIL LVAPIFVLNK
ESLFPGWAAV PSCLGTALLI WANDQNKWIG KLLKLRFMQF TGKISYSMYL WHWPIVVFYG
YWIIRDLVWW DTLLLVIVTY AISHLSCKYL EAPFRLHRGD ILRPLKVYST SIAFSFVIFV
LGVLVWKADG YKARFPHFVE QLNLKDAHKE SGFAGCFIKE DQFYNDNWSY DSCVMTMPGA
TETILLWGDS HAFHLIGGLK TIQQELNVNI ALYASAGCSP LFDTDIPRNP QCRANNEFVK
ELIDTHNING LVLAGNWAWA FKVEDPDIDL SSVRSTFTAL TEADKKVFVV NQVPIYPVKN
PAFLGMRLST SSKAPQDYLL APEYGVKASE QIKSLLPDEN VFSPQDLLCE KGKCLIYRNK
EIMVRDRAHL SSAASIYIVQ SMAPKLKNAL GLGLK