Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1084 |
Symbol | |
ID | 4172623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1301914 |
End bp | 1303821 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638054090 |
Product | acyltransferase 3 |
Protein accession | YP_660664 |
Protein GI | 109897409 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1835] Predicted acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.87667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACATC GTCAAGATAT TGATGGTTTG CGCGCGATAG CAGTTCTTGC TGTGGTACTT TTCCATTTTG GTGTAACGGG TATGTCGGGT GGTTATGCTG GCGTCGATAT ATTTTTTGTC ATCTCTGGTT TTCTCATTAC CTCTATTCTA ATGAAAGATG CAGAAACTCA ATCTATTAGC TTTCTAGGTT TTTATGAAAA ACGTATTAGA AGGCTATTTC CAGCCCTTTT TGCAACCGTA CTGGCTTCTT TCATCGCTGC ATATTTTATC TTTATGCCCG ATGAATTTAG GGAGTTTGGC AGAAGCGCCA TTGCCGCCAT CGTTTATCTA TCTAATGTAT TTTTTTGGCT CAGTAGTGAT TATTTTCAGG GCTCTTCGGA ATTAAGCCCA TTATTGCATA CATGGTCGCT TGCGGTAGAA GAGCAATTTT ATTTGATATT TCCCGTCATT GTGTGGGCAA GCTATAAATT GGGTAAACGG GCTTTTTATT GGTCTGTAGC CTCTTTATTC ACATGCTCAT TCGTTGCTTC AATATGGTAT ATAAGCATCT CTGCTAGTAC GGTGTTTTAT TTGTCTCCCT TTCGATTTTG GGAGTTACTA GCGGGTTCCA TAGTTGCCAT TGCATTCAAA GAAAACCTTG TCCCCAACGC AAAGATAGCA AGTTGGTTAG GAGTCTTAGG CCTGATTTTG CTTGTTGCGC CTATTTTTGT TCTCAATAAA GAAAGCTTAT TCCCAGGCTG GGCGGCAGTA CCTTCTTGTT TAGGCACGGC TTTACTGATT TGGGCGAATG ATCAGAATAA ATGGATAGGC AAGCTGCTCA AACTAAGATT TATGCAATTT ACGGGAAAAA TTTCCTATTC AATGTACCTT TGGCACTGGC CCATCGTAGT GTTTTACGGT TACTGGATTA TTAGGGATCT TGTTTGGTGG GATACGCTTT TATTGGTAAT CGTGACCTAC GCCATCAGTC ATTTATCCTG CAAGTACCTA GAAGCACCGT TCAGGCTCCA TCGGGGTGAC ATTTTGCGCC CGCTAAAAGT CTACTCAACG TCCATTGCAT TTAGCTTCGT TATATTTGTT CTTGGTGTAT TGGTTTGGAA AGCAGACGGT TATAAAGCCA GATTCCCTCA CTTTGTTGAA CAACTCAACT TGAAGGACGC TCATAAAGAG AGCGGATTTG CAGGCTGCTT TATTAAAGAA GATCAGTTTT ATAATGACAA TTGGAGCTAC GATTCGTGCG TTATGACAAT GCCCGGTGCA ACAGAAACCA TTTTACTGTG GGGAGACTCA CATGCGTTTC ATCTCATCGG CGGACTCAAA ACGATTCAGC AAGAGCTAAA TGTGAATATT GCGCTTTACG CCAGCGCCGG TTGCTCCCCA TTGTTTGACA CCGATATTCC GCGCAACCCC CAATGCCGAG CGAACAATGA ATTTGTCAAA GAGCTTATTG ATACCCATAA CATCAATGGT TTGGTTTTGG CTGGAAATTG GGCTTGGGCA TTCAAAGTCG AAGACCCTGA TATCGATTTA TCGAGTGTGC GCTCAACATT TACTGCACTG ACTGAAGCGG ATAAAAAAGT GTTTGTTGTT AATCAAGTCC CCATTTACCC CGTAAAGAAC CCTGCGTTCT TAGGCATGCG CCTGTCCACT TCATCCAAAG CACCACAAGA TTATCTTTTG GCCCCTGAGT ACGGTGTAAA GGCTTCCGAA CAAATAAAAT CGTTATTACC AGATGAAAAT GTATTTAGCC CACAAGATTT ATTGTGTGAA AAGGGCAAGT GCCTTATATA TCGTAATAAA GAAATAATGG TCAGGGATAG AGCACATCTT TCTAGTGCGG CCAGTATATA TATTGTGCAG TCAATGGCAC CTAAATTAAA AAATGCGCTA GGCCTAGGTT TGAAATAA
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Protein sequence | MKHRQDIDGL RAIAVLAVVL FHFGVTGMSG GYAGVDIFFV ISGFLITSIL MKDAETQSIS FLGFYEKRIR RLFPALFATV LASFIAAYFI FMPDEFREFG RSAIAAIVYL SNVFFWLSSD YFQGSSELSP LLHTWSLAVE EQFYLIFPVI VWASYKLGKR AFYWSVASLF TCSFVASIWY ISISASTVFY LSPFRFWELL AGSIVAIAFK ENLVPNAKIA SWLGVLGLIL LVAPIFVLNK ESLFPGWAAV PSCLGTALLI WANDQNKWIG KLLKLRFMQF TGKISYSMYL WHWPIVVFYG YWIIRDLVWW DTLLLVIVTY AISHLSCKYL EAPFRLHRGD ILRPLKVYST SIAFSFVIFV LGVLVWKADG YKARFPHFVE QLNLKDAHKE SGFAGCFIKE DQFYNDNWSY DSCVMTMPGA TETILLWGDS HAFHLIGGLK TIQQELNVNI ALYASAGCSP LFDTDIPRNP QCRANNEFVK ELIDTHNING LVLAGNWAWA FKVEDPDIDL SSVRSTFTAL TEADKKVFVV NQVPIYPVKN PAFLGMRLST SSKAPQDYLL APEYGVKASE QIKSLLPDEN VFSPQDLLCE KGKCLIYRNK EIMVRDRAHL SSAASIYIVQ SMAPKLKNAL GLGLK
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