| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1071 |
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| Symbol | |
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| ID | 4172857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1284958 |
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| End bp | 1286100 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054077 |
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| Product | hypothetical protein |
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| Protein accession | YP_660651 |
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| Protein GI | 109897396 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5338] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03016] uncharacterized protein, PEP-CTERM system associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTGTTCGT CGTCATTTGC CCAAGAGGAG GTCGGGATTG ACCTTGGTGC ATTCGAATTA
GTACCAACAC TGACAACAAC GGTTGGTTTT AACGACAACG TCACTCGCTC TAATGAGGAA
GGAATAGACA GTTGGTTTAG CACCGTCACC CCAAGGTTCA CGCTAGTAAA CGACTTCGGC
CTAAATAGTT TGCGTTTAGG TTATCAGCTT TCTCGAGGTG ATTACTTCTC CAGTTCCGCG
GATGATTACA CTGACCATTT ATTATTTGCA TCATTGGATT ATGAGTTAAA TAGCCGTAAT
AGGATCAAAG CCGGAGTCAA TTTCGAAGAT GGCCACGATG ACCGGGGTGA AGCCTTCTCG
TTAGGAAATG GCAACGAATT AAATTCACCA GATGAGTTCA GAGAAAGTGA GGCGGATTTC
ACCTATTCTT ATGGTGCTCT GAGTGCTAAG GCAAGATTGG ATTTGAATGT TAACTACCGA
GATCTTGATT ACAAACTGGG TACAACAGAG TATTTAATCC GCGACCGAAC CAAAAGTACG
GTAGCGGGGA CATTCTATTA TAACATTGGT GCCGCTACGG ATTTACTGTT TGAAACGTCA
ATAACCGACG TTGAATACGA TTTTGCAACG TCAGACGCAA ATTCTTTAGA CAGTATTGAA
ACGAGTTATT TAATTGGTGC ACAGTGGCAA TCTACGGCAT CCACTTCAGG CTTCGCTAAG
ATCGGTTACC AAGATAAAGA TTTTGATGCT TCAGGCCGTG AGAACTTCTC TGGTACAACC
TGGGAAGCTG GCGTTATATG GGAGCCCTTA GAGCGCGCTA CCTTTATTTT GGATACTGAC
AATTCGGCAC GTGAAACCAA TGGCGACGGT AACTTTATTC GCAGTAAAGA TGTGTCTCTT
CAATGGCGAC ATGAGTGGCT ACAAAGACTT CGAACGCAAG CTGGTGTGTC TGTTGGCACC
GATGATTACG AAGGCAGTGG CCGAACTGAT GACGTTACAG ACTGGAATTT TGCTGTCATA
TACGAATTTC AACGTTGGTT GACCTTCAAT TTGGGATATA CCTATAGTGA GCGAGACAGT
AATCGAGATA TAATCGATTA CGATCAAAAT ATTTTTCGCT TAACGGCAAG AGCAACCTTG
TAG
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| Protein sequence | MCSSSFAQEE VGIDLGAFEL VPTLTTTVGF NDNVTRSNEE GIDSWFSTVT PRFTLVNDFG
LNSLRLGYQL SRGDYFSSSA DDYTDHLLFA SLDYELNSRN RIKAGVNFED GHDDRGEAFS
LGNGNELNSP DEFRESEADF TYSYGALSAK ARLDLNVNYR DLDYKLGTTE YLIRDRTKST
VAGTFYYNIG AATDLLFETS ITDVEYDFAT SDANSLDSIE TSYLIGAQWQ STASTSGFAK
IGYQDKDFDA SGRENFSGTT WEAGVIWEPL ERATFILDTD NSARETNGDG NFIRSKDVSL
QWRHEWLQRL RTQAGVSVGT DDYEGSGRTD DVTDWNFAVI YEFQRWLTFN LGYTYSERDS
NRDIIDYDQN IFRLTARATL
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