| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1070 |
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| Symbol | |
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| ID | 4172856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1282626 |
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| End bp | 1284035 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054076 |
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| Product | sugar transferase |
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| Protein accession | YP_660650 |
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| Protein GI | 109897395 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03023] Undecaprenyl-phosphate glucose phosphotransferase
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAACA AAAGCCCCGG GGGCATAATT CAAAGTAACC AGAGTAGTTT TTCTACTCTG
TATCGTTTAG TCGATATGGT TATTATTACT TTGGTGTATT TTCTTGTGTT GTTGTATCAA
GGGCTAGCCA TCAACACTGC TGGCTTATTG TTACTCTTTG TCAGCATCAT TTCTTATATG
TTGTGTGCAG AGGCTGTAGA TCTCTATCGC TCTTGGCGAA CGGCTTCCAA TACACTAATG
ATAAAATGGG CCATGGTCGC TTGGGGCGTT TCCTCTCTTG TTACGACCAC CTTCGCCTTT
ATTTTCCCCG ATGCTATTGC TGCATCAAAC TTCGTTATTG TAAGTTGGTT AGTCTTGTGT
GCCCCGACAC TGGTGAGCTG GCGCGTGGCG TTTCGCGAAA TATTATTTAG GCACCGTAAA
AAAGGCCACA ATACGCGCAG AGCGATTGTG ATTGGTGCGA CGCAATCGGG ATATAATCTT
GCCAACCAAA TAATGGAGAA TGATCAACTA GGGATCATTT TCAAAGGCAT GTACGATGAC
CGAGCTCCGG CTCGTATCCC CCATGAAATT CAGCACCAAG TGATGGGCAG CATTCAAGAT
GCCATTAAAC TAGCCAAAGA AGGCGAGGTA GATTACATCT ATATCGCCAT GCCCATGAGC
GCCGAGAAGC GTATCATGCA GATTTTAAAC ATGTGCAGTG ACTCTACCGC TACTGTCTAT
ATCATCCCTA ACTTCTTTAT GTATAACCTG TTGAATGCAC GCTGGCAGAG TGTTGGTTCG
ATTCAAACTT TGAGCGTATT TGATACGCCC TTTCAAGGTG CAGGCGATAT CACTAAGCGT
TTAGAAGATA TTGTTGTGTC GTCATTAATT TTGACGATGA TCGCCATCCC CATGCTATTT
ATTGCCATGG CAGTGAAATT AACCTCTAAA GGCCCTGTGA TTTTCAAGCA AAACCGATAC
GGTTTAGATG GCAAGAAAAT CAAAGTGTAT AAGTTTCGCT CCATGACGGT GCAAGACAAC
GGCGATAAAG TGCAGCAAGC GACCAAAAAT GATGCACGCA TTACGCCCCT TGGTGCCTTT
TTACGTAAAA CTTCGTTGGA TGAATTGCCA CAGTTTATCA ACGTGTTACA AGGTCGCATG
TCAGTTGTTG GGCCGCGCCC TCATGCGGTT GCGCACAATG AAGAATATCG TAAGTTGATT
GAAGGCTATA TGCTGCGTCA TAAAGTACGC CCTGGCATCA CTGGCTGGGC GCAAATCAAC
GGCTTTCGCG GTGAGACTGA AACCATCAAC AAGATGATTA AGCGCGTAGA ATATGATTTG
GATTATATAC ACCGCTGGTC AGTGTGGATG GATATTCGAA TTATACTCGC CACCGTTACC
CGTGGGTTTA TTAATAAAAA TGCTTATTAA
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| Protein sequence | MHNKSPGGII QSNQSSFSTL YRLVDMVIIT LVYFLVLLYQ GLAINTAGLL LLFVSIISYM
LCAEAVDLYR SWRTASNTLM IKWAMVAWGV SSLVTTTFAF IFPDAIAASN FVIVSWLVLC
APTLVSWRVA FREILFRHRK KGHNTRRAIV IGATQSGYNL ANQIMENDQL GIIFKGMYDD
RAPARIPHEI QHQVMGSIQD AIKLAKEGEV DYIYIAMPMS AEKRIMQILN MCSDSTATVY
IIPNFFMYNL LNARWQSVGS IQTLSVFDTP FQGAGDITKR LEDIVVSSLI LTMIAIPMLF
IAMAVKLTSK GPVIFKQNRY GLDGKKIKVY KFRSMTVQDN GDKVQQATKN DARITPLGAF
LRKTSLDELP QFINVLQGRM SVVGPRPHAV AHNEEYRKLI EGYMLRHKVR PGITGWAQIN
GFRGETETIN KMIKRVEYDL DYIHRWSVWM DIRIILATVT RGFINKNAY
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