| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1066 |
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| Symbol | |
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| ID | 4172852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1276355 |
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| End bp | 1276924 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054072 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_660646 |
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| Protein GI | 109897391 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACAAT CTCTTATCAA TACCAAAGTT TTACCGTTTA ACGCAACAGC ATTCAAAAAT
GGCGAGTTTG TTGAAGTGTC AGAAAAGGAC ATTGAAGGCA AATGGGCAAT CTTCATGTTT
TATCCTGCAG ACTTCACGTT TGTTTGCCCC ACAGAACTAG GCGATTTAGC TGACCATTAT
GCGAAATTAC AAGAACTAGG TGTTGATGTT TACTCTATAT CAACTGACAC CCATTTTACG
CACAAAGCAT GGCATAGCAG CTCAGACACC ATCAACAAAA TTGAATTTGC GATGATCGGC
GACCCAACGG GCAAAATTAC TCGTAATTTC GGTGTCATGA TCGAAGAAGA TGGCTTAGCA
CTTCGCGGCA CTTTCGTAGT GAACCCTGAA GGCGAAATCA AAATTGCTGA AATTCACGAT
CTAGGTATCG GCCGCTCTGC AAGCGAACTT CTGCGTAAAG TGCAAGCTGC ACAATATGTA
GCAAATCACG ACGGCGAAGT GTGCCCAGCA GCATGGCAGC CAGGCGAAGA AACATTGACG
CCTTCACTTG ACCTAGTCGG CAAAATCTAA
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| Protein sequence | MTQSLINTKV LPFNATAFKN GEFVEVSEKD IEGKWAIFMF YPADFTFVCP TELGDLADHY
AKLQELGVDV YSISTDTHFT HKAWHSSSDT INKIEFAMIG DPTGKITRNF GVMIEEDGLA
LRGTFVVNPE GEIKIAEIHD LGIGRSASEL LRKVQAAQYV ANHDGEVCPA AWQPGEETLT
PSLDLVGKI
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