Gene Patl_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1063 
Symbol 
ID4172849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1273676 
End bp1274083 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content45% 
IMG OID638054069 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_660643 
Protein GI109897388 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAC ATTTTCAAAA TTTGATGGAC GAAGAAGAAG CAGCAATCGA CATGACACCG 
ATGCTCGATG TGGTATTTAT CATGTTGATT TTCTTTATCG TCACCGCGTC TTTTGTTAAA
GAATCGGGTA TTGATGTGAA TCGTCCTGAA GCGGCGACAG CGGTCAAGAA AGACCGCGCC
AATATTCTGA TAGCCATCAG TGACAAAGGC GAAATATGGA TCAACAAACG TAAAATTGAT
GTGCGTGCAG TTCAAGCGAA TATTGAGCGT CTGCATGCGG AAAACCCACA AGGTACTGTG
GTGATCCAAG CGGATAAAAA ATCGACTACC GAAACCTTAA TTAAGGTCAT GGATGCCTCT
CGTGCCGCCG GTATTACCGA TGTTTCGATT GCAGCGCAAG AGCCCTAG
 
Protein sequence
MKQHFQNLMD EEEAAIDMTP MLDVVFIMLI FFIVTASFVK ESGIDVNRPE AATAVKKDRA 
NILIAISDKG EIWINKRKID VRAVQANIER LHAENPQGTV VIQADKKSTT ETLIKVMDAS
RAAGITDVSI AAQEP