Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1063 |
Symbol | |
ID | 4172849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1273676 |
End bp | 1274083 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054069 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_660643 |
Protein GI | 109897388 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAAC ATTTTCAAAA TTTGATGGAC GAAGAAGAAG CAGCAATCGA CATGACACCG ATGCTCGATG TGGTATTTAT CATGTTGATT TTCTTTATCG TCACCGCGTC TTTTGTTAAA GAATCGGGTA TTGATGTGAA TCGTCCTGAA GCGGCGACAG CGGTCAAGAA AGACCGCGCC AATATTCTGA TAGCCATCAG TGACAAAGGC GAAATATGGA TCAACAAACG TAAAATTGAT GTGCGTGCAG TTCAAGCGAA TATTGAGCGT CTGCATGCGG AAAACCCACA AGGTACTGTG GTGATCCAAG CGGATAAAAA ATCGACTACC GAAACCTTAA TTAAGGTCAT GGATGCCTCT CGTGCCGCCG GTATTACCGA TGTTTCGATT GCAGCGCAAG AGCCCTAG
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Protein sequence | MKQHFQNLMD EEEAAIDMTP MLDVVFIMLI FFIVTASFVK ESGIDVNRPE AATAVKKDRA NILIAISDKG EIWINKRKID VRAVQANIER LHAENPQGTV VIQADKKSTT ETLIKVMDAS RAAGITDVSI AAQEP
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