| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1051 |
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| Symbol | rdgC |
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| ID | 4172837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 1255365 |
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| End bp | 1256270 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054057 |
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| Product | recombination associated protein |
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| Protein accession | YP_660631 |
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| Protein GI | 109897376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2974] DNA recombination-dependent growth factor C |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00571241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTCA AAAACCTAAA ACTCTATCAT TTGACGCAAA CTCTCGACTT AACAGAAGAA
GACATACAAG ACAAACTCGC TGAATTCCCC TTTCGCCCTT GTGGCTCGCA AGAGCTAGCA
ACTATGGGTT GGACATCGCC AGTTGGCCAA GGCGATATGT TAGTACACAG TGCGGGCGGC
AAGTTTTGGT TAACGTTGAA GAAGCAGGAG CGGATCCTGC CAGCGGCAGT CGTGAACGCC
GAGTTAGCGG ACAAAGTGGC ACTAATGGAA GCTGAAACAG GCTCAAATGT AGGTAAAAAA
GCGCAGCAGG AAATGAAAGA AGAGATCATT CAGCGCTTAC TTCCACAAGC TTTTACTAAA
AATAGCTTTA GTCACGGCTT TATCTCTACT CAAGATAACT TAGTCGTAGT TGACGCCAGT
GCAGATGGCA AAGCTGAGAC TTTCTTGGCC ATGTTGCGAA AAGCAATTGG CTCATTGCCG
GTTGTGCCCC TAGCAAAACA AAGCGTGCAG GAAGAATTAA CGCATTGGTT AACGGACGAC
TCTGTGCCTA ATGATGTGGT GATTTTGGAA GAAGCGGAAC TTCGCTCTAT GGAAGAAGAC
GGTGCGATCG TGCGCTGTAA AAACCAAGAT CTTGGCAGTG AAGAAATTGC AAATCACTTG
AGCGCTGGCA AAACCGTGCA AAAAATTGCT ATCGAATGGG ATGAAACCTT TAGCGCATTG
TTACAAGAAG ACATGGCAGT TAAACGCCTT AAATTCACCG ATGTCATGAC AGAGCAAAAT
GACGACATTC CTAAAGAAGA TAAATTAGCT AAAATGGATG CCGATTTCGC CTTGATGTCT
GCTGAAATAG TGCGCTTTTC AAAGCGCTTA GTTGAGATAT TTAATCTGCA GCAAGATCAG
GAATAA
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| Protein sequence | MWFKNLKLYH LTQTLDLTEE DIQDKLAEFP FRPCGSQELA TMGWTSPVGQ GDMLVHSAGG
KFWLTLKKQE RILPAAVVNA ELADKVALME AETGSNVGKK AQQEMKEEII QRLLPQAFTK
NSFSHGFIST QDNLVVVDAS ADGKAETFLA MLRKAIGSLP VVPLAKQSVQ EELTHWLTDD
SVPNDVVILE EAELRSMEED GAIVRCKNQD LGSEEIANHL SAGKTVQKIA IEWDETFSAL
LQEDMAVKRL KFTDVMTEQN DDIPKEDKLA KMDADFALMS AEIVRFSKRL VEIFNLQQDQ
E
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