| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1050 |
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| Symbol | |
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| ID | 4172836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1254453 |
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| End bp | 1255289 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054056 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_660630 |
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| Protein GI | 109897375 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00648352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACAG AAAATGCGTT ATTAACCATC TTGGTCGAAA AAATAAACAA CGATACATTA
GTGCTACCAA CGCTTCCCGC AATTGCTTTG AAAGTTAGAA AGGCTGCGGA CGATCCGAAT
ATTAACCTAA ATGCCATGGC TGATGTCATT GGCCAAGATC CGTCACTCTC CGCGCGGATG
ATCAAAATAT CCAACAGTTC TTACATGGGT AGAAGTGTCA AAGTAACGTC TACCTCACAA
GCTGTTACAC GTATCGGTTT ACGTCAGATA AAGAATATTG CGACTGCGCT AGCCATGGAG
CAACTGTTTG TCTCTAAAAA CGATATTGTG AAAAACTACT TGGATAATGT GTGGCAACAA
AACCTGAAAG TGGTTGCGGC CGCGATGTCG GTTATGCAAC TGCACGTTAA AGAAACCAAA
AATCGCACCC TTAATTTAGA CACCATGACC CTTGCTGCCT TAGTCCACAA TATTGGTGTA
CTACCGATTT TGACCGAAGC CGAACGTCAC CCGGAAGTGT TTGCCAATCC TACCTTTTTA
AATGTGGCGA TCGATAAATT AGCTGGACGA ATTGGTGCAA GCATCATGCG TGAATGGGGC
TTCGAGCAAG AATTTGTTAA TGTTGCTGAA AACTGGCGCG ATATGTCAGT CCAGACGGAT
ATGATTTCCT ATCTTGATTT CACTCGTTTA GGCGCGGTTA TGGCAGGCTT ATATGACTCA
CAGAAAGACG CTCTGCTCAA TTTAGCGGTG CAAAAGGGGA TATTGGCAGA CTTGACAGTC
TTACAATCAG ATGAGTATCA AGAGCTTTAC GATAGCGCCA TTGCTGTATT CGCTTAA
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| Protein sequence | MSTENALLTI LVEKINNDTL VLPTLPAIAL KVRKAADDPN INLNAMADVI GQDPSLSARM
IKISNSSYMG RSVKVTSTSQ AVTRIGLRQI KNIATALAME QLFVSKNDIV KNYLDNVWQQ
NLKVVAAAMS VMQLHVKETK NRTLNLDTMT LAALVHNIGV LPILTEAERH PEVFANPTFL
NVAIDKLAGR IGASIMREWG FEQEFVNVAE NWRDMSVQTD MISYLDFTRL GAVMAGLYDS
QKDALLNLAV QKGILADLTV LQSDEYQELY DSAIAVFA
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