Gene Patl_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1044 
Symbol 
ID4172830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1248292 
End bp1248651 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content44% 
IMG OID638054050 
Productdihydroneopterin aldolase 
Protein accessionYP_660624 
Protein GI109897369 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1539] Dihydroneopterin aldolase 
TIGRFAM ID[TIGR00525] dihydroneopterin aldolase
[TIGR00526] FolB domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00112146 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAAA TTTACATTGA AGGCTTAGAG GTACAATCTC TAATAGGCGT GTACGATTGG 
GAGCGGGATG CGACGCAGCG ATTGCTGGTC GATATAGTGT TATTTAGTGA TTTACAAAAG
CCTGCCTATA GCGATGATGT TGACGATACG CTGAATTACG CTGAGGTAGC ACAAGCTGTG
ACAGACGTGG CTGCAAAGAG TCAATTTGCG TTAATTGAAG CGCTAGCTCA AGCCATGATC
AACCAAGTCT TCAGCCAATT TCCTGTGCAA AAAATGACCT TGAAATTGAG CAAACCTGAC
ATTTTACCTT CAGCTCAAAA TGTCGCGGTC GAGTTTACTC GTGAGCGCAA AGACACATGA
 
Protein sequence
MDKIYIEGLE VQSLIGVYDW ERDATQRLLV DIVLFSDLQK PAYSDDVDDT LNYAEVAQAV 
TDVAAKSQFA LIEALAQAMI NQVFSQFPVQ KMTLKLSKPD ILPSAQNVAV EFTRERKDT