Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1044 |
Symbol | |
ID | 4172830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 1248292 |
End bp | 1248651 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054050 |
Product | dihydroneopterin aldolase |
Protein accession | YP_660624 |
Protein GI | 109897369 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1539] Dihydroneopterin aldolase |
TIGRFAM ID | [TIGR00525] dihydroneopterin aldolase [TIGR00526] FolB domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00112146 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAAAA TTTACATTGA AGGCTTAGAG GTACAATCTC TAATAGGCGT GTACGATTGG GAGCGGGATG CGACGCAGCG ATTGCTGGTC GATATAGTGT TATTTAGTGA TTTACAAAAG CCTGCCTATA GCGATGATGT TGACGATACG CTGAATTACG CTGAGGTAGC ACAAGCTGTG ACAGACGTGG CTGCAAAGAG TCAATTTGCG TTAATTGAAG CGCTAGCTCA AGCCATGATC AACCAAGTCT TCAGCCAATT TCCTGTGCAA AAAATGACCT TGAAATTGAG CAAACCTGAC ATTTTACCTT CAGCTCAAAA TGTCGCGGTC GAGTTTACTC GTGAGCGCAA AGACACATGA
|
Protein sequence | MDKIYIEGLE VQSLIGVYDW ERDATQRLLV DIVLFSDLQK PAYSDDVDDT LNYAEVAQAV TDVAAKSQFA LIEALAQAMI NQVFSQFPVQ KMTLKLSKPD ILPSAQNVAV EFTRERKDT
|
| |