| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_0987 |
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| Symbol | |
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| ID | 4173489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 1178871 |
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| End bp | 1179578 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638053988 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_660567 |
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| Protein GI | 109897312 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000260123 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAA AGTCTTTGTT GCTGATCGAT GACGATCAAG CACTCACCGA GTTGTTACAG
GAATACCTAA GCGCGCAAGG ATACACGATT CATGTGGCAA GTGATGGGGA GGCCGGCCTG
TTAGCTGCGA AATCAGGGCA GCACTATGAT TTAATCATTT TGGATGTAAT GCTTCCTAAA
GTAGACGGGT TCGAAGTATT AAAACGTTTA CGTAGTACAC ATGTTACCCC TGTGTTGATG
TTAACTGCCA AAGGCGATGA TTTTGATCGA ATATTAGGCT TGGAACTCGG TGCCGACGAC
TATTTGGCAA AACCTTTCAA CCACAGAGAG TTATCGGCCA GAGTGAAAGC TATTGTGCGC
CGTGTAGATA TTCAAGCCGG CTTGCAAAGC GACAAGCAAA AACAAAACAC AATCGAAATT
GGTGATGTGG AGTTAAATAT TGCAGCGCAA ACTGTCGCAT GTAACGCCCA GCAAGTGGAG
TTGACCGGCA CCGAATTTGC GGTGCTGAAA CTGTTGATGA GCTGTAGCCC GGATCTCGTG
CCTAAACAGG CAATAAGTGA GCAGGTATTA GGTCGAAAGC TAGCCGCTTT TGATCGCAGT
ATTGATATGC ACGTGAGCAA TTTACGTAAG AAATTAAGTC ATTTTAGTGA CCATGACAAA
ATCAAAACCC ATCGAGGGGT AGGATACGTC TATTTGGGTG AAATATGA
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| Protein sequence | MLEKSLLLID DDQALTELLQ EYLSAQGYTI HVASDGEAGL LAAKSGQHYD LIILDVMLPK
VDGFEVLKRL RSTHVTPVLM LTAKGDDFDR ILGLELGADD YLAKPFNHRE LSARVKAIVR
RVDIQAGLQS DKQKQNTIEI GDVELNIAAQ TVACNAQQVE LTGTEFAVLK LLMSCSPDLV
PKQAISEQVL GRKLAAFDRS IDMHVSNLRK KLSHFSDHDK IKTHRGVGYV YLGEI
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