Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_0986 |
Symbol | |
ID | 4173488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 1177846 |
End bp | 1178694 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638053987 |
Product | hypothetical protein |
Protein accession | YP_660566 |
Protein GI | 109897311 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000136612 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGAACGT TAAAATCATT ATTTACCCCC ATCGCCGTTG CTTTGGCATT CCTGTTGACT CAGCATGTCG CTATTGCAAA ACCTTCGCCG CATAATGGCC AAATACCCTT ACGCCCAATT TTAAAAAAGT TAGATTTAAC CGGCGCACAA CGTCAAGACG TTCGATTACT GTTAAAACAA AACCGTGCGA CAAAAGATAC CTATCAGCCA GACCAAAGAT CTATGCGTGA GAGCTTACGC AATTTAATAC AAAGTGATGT ATGGGTTCAA AGTGAAATAA GCAGCGCTAT TCATGCTGAA CAACACTTAC AAAATCAGCT AATGTGGCTG GATATTAAAA CTCAGCAGCA AATTTGGCAG ATTTTAGACG ATGGCCAGAA AGAAGCGTTC TTGGTCGAAT TAAATGCTAA GCAGCAAGAA AAAGGACATG CCGCCAAGTT ACAGCAGAGC AAAACACGGG GTAACAGCAT ACCCATCATG TCTGAGGCAC AACGCCAAGC AGCGCACTTC GAAACACTTA ACCTAACCGA GGAGCAACAA GCTCTATTTA AAGCACAACG CGCTGCTGAA GAAGCGGATA AAGAAGCAAA CAAATTTGCT AGGGAGACAT TTGAGGCACA AGTTATTGCG ATAGTGACCA GTGAAAGTCT GAGCGAAACT AGTTGGACAG CCTTACAAGC CGAAACCGAA GTACGGCGCT ATGAACATGC TCTTACTAGG GCTAAAAATC AGCACACGTT TTGGAATGCA CTGACCAGCG AACAACAGAT AACACTCCAT AGAATGATGG AAAGTCGGCA TAAACGAGAG AGTAAAAAGC GTAATTCATT TGGAAAAGCC GATAGCTAA
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Protein sequence | MRTLKSLFTP IAVALAFLLT QHVAIAKPSP HNGQIPLRPI LKKLDLTGAQ RQDVRLLLKQ NRATKDTYQP DQRSMRESLR NLIQSDVWVQ SEISSAIHAE QHLQNQLMWL DIKTQQQIWQ ILDDGQKEAF LVELNAKQQE KGHAAKLQQS KTRGNSIPIM SEAQRQAAHF ETLNLTEEQQ ALFKAQRAAE EADKEANKFA RETFEAQVIA IVTSESLSET SWTALQAETE VRRYEHALTR AKNQHTFWNA LTSEQQITLH RMMESRHKRE SKKRNSFGKA DS
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