Gene Patl_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_0970 
Symbol 
ID4173819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp1161270 
End bp1162760 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content46% 
IMG OID638053971 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_660550 
Protein GI109897295 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.149525 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAG ATAATTCATC CGCCCCGTGC GACTTTGTTC TATTTGGTAC TAAAGGTGAC 
TTAGCTCGCC GCAAATTACT TCCGTCGCTT TACCAGTTAG AGAAAGCAGA ACTCATGCAC
GCTGAAACAT CGATTTTAGG GGTAGCCCGA GACGACATCA GCTTGCAAGA CTACGTAGCA
CTTGTAAAAG AAAATATTGA ACAGTTTAGT GGCGAGACCC TTTGTGATGA AACATGGGAG
CGTTTCTCCG CTAAATTAGA TTATGTGTGC GTCGATATGA AAAACGCAGA AAGTTACAGC
GTCTTCGGTG AGCATGTTGA TGCCTCACGC ACCATGGTCT GCTACTTCGC TACGCCTCCT
TCTATCTTCG GTGATATTTG CCGTGGCCTT AAAGCGGCAA ACGTTATCGA TAAAAGCATG
CGCGTCGTTC TTGAAAAGCC GATTGGCCAC GATTTAGCGT CCTCTAAGGT GATTAACGAT
CAGGTCGCTG AGTTCTTCGA TGAGTCACAA ATTTATCGTA TCGATCACTA CCTAGGTAAA
GAAACGGTTT TGAACCTGAT TGCGCTGCGT TTTGCGAACT CTATTTTCGC GACCAATTGG
GATCACAACA GTATCGATCA TGTACAGATC AGCGTGGCTG AATCGGTGGG GATTGAAGGG
CGTTGGGGAT ATTTTGACAC CGCTGGACAA ATGCGCGACA TGGTCCAAAA CCACTTGTTG
CAAATTTTGA CATTGATTGC CATGGAACCG CCAACAACTT TGGATGCTGA CAGTATTCGC
GGTGAAAAAT TAAAAGTCTT AAAAGCGTTA CGCCCCATCA ACTCAACCAA TATCAATCAG
AAAAGTGTTC GTGGACAATA TATTGGTGGT TTTGTGAAGG GCAAAGAAGT GCCTGGTTAT
CTGGACGAAC CGGATGCAAA CCCACGTAGT GAAACAGAAA CTTTTGTAGC GCTAAATGTG
GACATTGATA ACTGGCGTTG GGCCGGTGTG CCGTTCTATT TACGCACGGG TAAACGCCTG
CCGAACAAAA CCAGTGAAGT GGTTATTTAT TTTAAACGCC AGCCTCATAA CTTATTTGAA
GACAGTTTCG CACAATTGCC ACCGAACAAG CTCACCATTC GCTTGCAGCC GGATGAAGGC
GTTGAAGTCA CAGTCATGAA CAAAGTTCCT GGTTTGACAG GGACTAGCGG TATGGATTTG
CAGAAATCAC GTTTGAACTT GAGTTTCTCT GAGGCGTTCC AAGATGATCG TATCGCTGAT
GCATACGAAA AATTACTGCT TGAAGTGATG CTGGGTAATC AAGCCTTGTT CGTTAGCCGT
GATGAAGTGG AATTTGCTTG GAAGTGGGTT GACGGCATTA TCGATGCTTG GAAACACACC
AATGAGCCGC CTGAGCCTTA TCAAGCCGGC ACGTGGGGAC CAGTGGCCTC AATCGCTCTA
CTCGCCCGTG AAAACCGAGC ATGGTACGAA AGCAGAATAG GAAAGAAATA A
 
Protein sequence
MTLDNSSAPC DFVLFGTKGD LARRKLLPSL YQLEKAELMH AETSILGVAR DDISLQDYVA 
LVKENIEQFS GETLCDETWE RFSAKLDYVC VDMKNAESYS VFGEHVDASR TMVCYFATPP
SIFGDICRGL KAANVIDKSM RVVLEKPIGH DLASSKVIND QVAEFFDESQ IYRIDHYLGK
ETVLNLIALR FANSIFATNW DHNSIDHVQI SVAESVGIEG RWGYFDTAGQ MRDMVQNHLL
QILTLIAMEP PTTLDADSIR GEKLKVLKAL RPINSTNINQ KSVRGQYIGG FVKGKEVPGY
LDEPDANPRS ETETFVALNV DIDNWRWAGV PFYLRTGKRL PNKTSEVVIY FKRQPHNLFE
DSFAQLPPNK LTIRLQPDEG VEVTVMNKVP GLTGTSGMDL QKSRLNLSFS EAFQDDRIAD
AYEKLLLEVM LGNQALFVSR DEVEFAWKWV DGIIDAWKHT NEPPEPYQAG TWGPVASIAL
LARENRAWYE SRIGKK